RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 NQO1P15559 274 aaKnown RBP2□□□□□ -2.09
CDC42BPA-211ENST00000466538 ORM2P19652 201 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 ATP6V0CP27449 155 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 GRPRP30550 384 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 OPRM1P35372 400 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 SLC35A2P78381 396 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 GLO1Q04760 184 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 BSPH1Q075Z2 132 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 Q6ZRU5 148 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 DOLPP1Q86YN1 238 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 TMEM75Q8N9X5 138 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 GPR32P1Q8NGA4 272 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 TLCD1Q96CP7 247 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 KCTD7Q96MP8 289 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 C20orf166-AS1Q96NR2 134 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR7D2Q96RA2 312 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 C1QTNF6Q9BXI9 259 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 GNB1LQ9BYB4 327 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 MED28Q9H204 178 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 ATPIF1Q9UII2 106 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 DNAJC12Q9UKB3 198 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 GUCA1BQ9UMX6 200 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 MRPS16Q9Y3D3 137 aaKnown RBP2□□□□□ -2.09
CDC42BPA-211ENST00000466538 ATAD5Q96QE3 1844 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 NPATQ14207 1427 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 CHD2O14647 1828 aaKnown RBP1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 IGSF23A1L1A6 192 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 IGLV3-27P01718 113 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 LINC00614P0C842 121 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 IGHV3-30-3P0DP02 117 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 CDK2P24941 298 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 CD79BP40259 229 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR1E2P47887 323 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 POLR2GP62487 172 aaKnown RBP eCLIP1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 REEP5Q00765 189 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 DR1Q01658 176 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 PDGFRLQ15198 375 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 UAP1Q16222 522 aaPredicted RBP1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 TMEM176BQ3YBM2 270 aaPredicted RBP1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 ACSM3Q53FZ2 586 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 ACSBG2Q5FVE4 666 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 ZNF322Q6U7Q0 402 aaPredicted RBP1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 MFSD8Q8NHS3 518 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 PPCDCQ96CD2 204 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 ACY3Q96HD9 319 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 UPK3BQ9BT76 320 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 KRTAP4-3Q9BYR4 195 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 SLC22A4Q9H015 551 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 MS4A6AQ9H2W1 248 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 SAMHD1Q9Y3Z3 626 aaKnown RBP1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 ALG5Q9Y673 324 aa1.99□□□□□ -2.09
CDC42BPA-211ENST00000466538 METTL15A6NJ78 407 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 ACOX3O15254 700 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 PLXNB1O43157 2135 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 STK16O75716 305 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 TYMSP04818 313 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 ISG15P05161 165 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 CRYGDP07320 174 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 CD7P09564 240 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR13C7P0DN81 318 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 UGT2B7P16662 529 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 MIPP30301 263 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 IFNGR2P38484 337 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 FGF12P61328 243 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 ARF6P62330 175 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 MRPL51Q4U2R6 128 aaKnown RBP1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 SPATA31B1PQ5VZV4 182 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 LRRN1Q6UXK5 716 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 MSRB3Q8IXL7 192 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 CYGBQ8WWM9 190 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 ABHD14BQ96IU4 210 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 STACQ99469 402 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 DHRS9Q9BPW9 319 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 MND1Q9BWT6 205 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 SMDT1Q9H4I9 107 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 TUBA4BQ9H853 241 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 XPNPEP1Q9NQW7 623 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 PARVAQ9NVD7 372 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 MMACHCQ9Y4U1 282 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 HSPE1-MOB4S4R3N1 261 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 NLRC5Q86WI3 1866 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 ZNF407Q9C0G0 2248 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 ADAMTSL1Q8N6G6 1762 aa1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 EIF3AQ14152 1382 aaKnown RBP1.98□□□□□ -2.09
CDC42BPA-211ENST00000466538 COL5A1P20908 1838 aaPredicted RBP1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 LOC102725191A0A1B0GVB3 256 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 SDHAF1A6NFY7 115 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 SMIM23A6NLE4 172 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 C17orf98A8MV24 154 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 TMEM238C9JI98 176 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 M0R036 132 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 KPNA3O00505 521 aaPredicted RBP1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 HLA-DRAP01903 254 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 HIST1H1EP10412 219 aaKnown RBP1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 HSPA9P38646 679 aaKnown RBP1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 GNG10P50151 68 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 SERPINB9P50453 376 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 CEBPGP53567 150 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 PSG4Q00888 419 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms