RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 PDPNQ86YL7 162 aa10.45□□□□□ -0.74
CHD3-207ENST00000466233 MUC7Q8TAX7 377 aa10.45□□□□□ -0.74
CHD3-207ENST00000466233 ELOVL1Q9BW60 279 aa10.45□□□□□ -0.74
CHD3-207ENST00000466233 C11orf54Q9H0W9 315 aaPredicted RBP10.45□□□□□ -0.74
CHD3-207ENST00000466233 LPAR5Q9H1C0 372 aa10.45□□□□□ -0.74
CHD3-207ENST00000466233 FBXL15Q9H469 300 aa10.45□□□□□ -0.74
CHD3-207ENST00000466233 CHMP1AQ9HD42 196 aaPredicted RBP10.45□□□□□ -0.74
CHD3-207ENST00000466233 C12orf4Q9NQ89 552 aa10.45□□□□□ -0.74
CHD3-207ENST00000466233 LSM2Q9Y333 95 aaKnown RBP10.45□□□□□ -0.74
CHD3-207ENST00000466233 FBXO7Q9Y3I1 522 aa10.45□□□□□ -0.74
CHD3-207ENST00000466233 A0A0G2JLM5 398 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 FOXI3A8MTJ6 420 aaPredicted RBP10.44□□□□□ -0.74
CHD3-207ENST00000466233 H7C2Y5 167 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 SLC17A2O00624 439 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 ARL6IP5O75915 188 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 LY86O95711 162 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 ARSBP15848 533 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 ZP3P21754 424 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 CEACAM6P40199 344 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 LGALS7P47929 136 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 HLA-DRB3P79483 266 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 PSG5Q15238 335 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 ECSCRQ19T08 205 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 RPL39P5Q59GN2 51 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 OR10K2Q6IF99 312 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 CEACAM19Q7Z692 300 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 OR4C12Q96R67 309 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 RANGRFQ9HD47 186 aaPredicted RBP10.44□□□□□ -0.74
CHD3-207ENST00000466233 Q9N2K0 584 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 SCN3BQ9NY72 215 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 ZNF221Q9UK13 617 aa10.44□□□□□ -0.74
CHD3-207ENST00000466233 FCN1O00602 326 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 HSPA12AO43301 675 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 PROP1O75360 226 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 CPEP16870 476 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 PITPNAQ00169 270 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 TPBGQ13641 420 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 RCN1Q15293 331 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 UNQ5815/PRO19632Q6UWF5 114 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 SBSPONQ8IVN8 264 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 UFD1Q92890 307 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 RCHY1Q96PM5 261 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 OR5B12Q96R08 314 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 NICN1Q9BSH3 213 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 TMED9Q9BVK6 235 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 ZMAT4Q9H898 229 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 METTL1Q9UBP6 276 aaKnown RBP10.43□□□□□ -0.74
CHD3-207ENST00000466233 AK3Q9UIJ7 227 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 STUB1Q9UNE7 303 aa10.43□□□□□ -0.74
CHD3-207ENST00000466233 IGHV4OR15-8A0A075B7B6 117 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 A0A087WW49 117 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 A0A0A6YYD4 124 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 IGLV1-51P01701 117 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 APOA2P02652 100 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 FRMD6-AS1P0C7T7 363 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 SPNP16150 400 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 SLURP1P55000 103 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 INSL4Q14641 139 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 IRF3Q14653 427 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 P2RY14Q15391 338 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 CASC10Q5T4H9 136 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 C5orf24Q7Z6I8 188 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 LFNGQ8NES3 379 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 OR56B1Q8NGI3 324 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 OR4A4PQ8NGN8 299 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 ARPC1AQ92747 370 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 RBMXL1Q96E39 390 aaKnown RBP10.42□□□□□ -0.74
CHD3-207ENST00000466233 ABHD14BQ96IU4 210 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 ASCL2Q99929 193 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 SIGLEC8Q9NYZ4 499 aa10.42□□□□□ -0.74
CHD3-207ENST00000466233 TRDCB7Z8K6 153 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 SOCS1O15524 211 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 IGKV1-16P04430 117 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 AADACP22760 399 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 TMEM50BP56557 158 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 TPPP2P59282 170 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 FXYD3Q14802 87 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 SRSF7Q16629 238 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHD3-207ENST00000466233 ZNF383Q8NA42 475 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 POC5Q8NA72 575 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 CITED4Q96RK1 184 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 TM2D3Q9BRN9 247 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 ALX4Q9H161 411 aaPredicted RBP10.41□□□□□ -0.74
CHD3-207ENST00000466233 DUSP21Q9H596 190 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 PLGRKTQ9HBL7 147 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 TPRKBQ9Y3C4 175 aa10.41□□□□□ -0.74
CHD3-207ENST00000466233 PTGES3LE9PB15 166 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 LDLRAD4O15165 306 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 CA2P00918 260 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 TRGV3P03979 118 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 SCTP09683 121 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 RRASP10301 218 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 RPS16P62249 146 aaKnown RBP10.4□□□□□ -0.74
CHD3-207ENST00000466233 MLLT11Q13015 90 aaPredicted RBP10.4□□□□□ -0.74
CHD3-207ENST00000466233 KLF5Q13887 457 aaPredicted RBP10.4□□□□□ -0.74
CHD3-207ENST00000466233 MED22Q15528 200 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 RAB11BQ15907 218 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 GLDNQ6ZMI3 551 aaPredicted RBP10.4□□□□□ -0.74
CHD3-207ENST00000466233 TMEM91Q6ZNR0 172 aa10.4□□□□□ -0.74
CHD3-207ENST00000466233 SETD6Q8TBK2 473 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms