RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 OR9G1Q8NH87 305 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 CT45A3Q8NHU0 189 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF596Q8TC21 504 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 NEK7Q8TDX7 302 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 ARL11Q969Q4 196 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 ST6GALNAC6Q969X2 333 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 MRPS24Q96EL2 167 aaKnown RBP3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 CPNE2Q96FN4 548 aaPredicted RBP3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 TM2D1Q9BX74 207 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 OR51E2Q9H255 320 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 SLC25A32Q9H2D1 315 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 NCOR1P1Q9H4R4 102 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 VCX3AQ9NNX9 186 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 OR6C3Q9NZP0 311 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 MSRB1Q9NZV6 116 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 DPM3Q9P2X0 92 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 AK3Q9UIJ7 227 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 KCNK7Q9Y2U2 307 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 MINOS1-NBL1R4GNA1 71 aa3.8□□□□□ -1.8
EXOSC3-204ENST00000465860 NOTCH3Q9UM47 2321 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 IGKV1-6A0A0C4DH72 117 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 TRDV1A0A1B0GX56 115 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 FUOMA2VDF0 154 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 BTBD17A6NE02 478 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM90A7PA6NKC0 464 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM90A23PA8MXZ1 464 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 LEUTXA8MZ59 168 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 MCRIP1C9JLW8 97 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 SDCBPO00560 298 aaPredicted RBP3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 PRYO14603 147 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 ORC5O43913 435 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 NAPSAO96009 420 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 SNRNP70P08621 437 aaKnown RBP3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 CD28P10747 220 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 ARSBP15848 533 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 GZMHP20718 246 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 GADD45AP24522 165 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 PSMB9P28065 219 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 BLVRBP30043 206 aaPredicted RBP3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 PPP1CCP36873 323 aaKnown RBP3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 KIR2DS4P43632 304 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 OR3A3P47888 321 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 KCNJ3P48549 501 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 VEGFCP49767 419 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 GPR176Q14439 515 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 HNF4GQ14541 408 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 NEDD8Q15843 81 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 TCTEX1D4Q5JR98 221 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 OR52W1Q6IF63 320 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF880Q6PDB4 577 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF773Q6PK81 442 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 SLC25A48Q6ZT89 311 aaKnown RBP3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 DRAM1Q8N682 238 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 KLHDC1Q8N7A1 406 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 OR6M1Q8NGM8 313 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 OR56B4Q8NH76 319 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 KCNG3Q8TAE7 436 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 MAFIPQ8WZ33 124 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 THRSPQ92748 146 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 FAM3DQ96BQ1 224 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 ARHGAP5-AS1Q96IT6 56 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 SLC25A33Q9BSK2 321 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 TMEM59Q9BXS4 323 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 PECRQ9BY49 303 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 YTHDF1Q9BYJ9 559 aaKnown RBP3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF696Q9H7X3 374 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 PLGRKTQ9HBL7 147 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 TAF9BQ9HBM6 251 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 TXNL4BQ9NX01 149 aaKnown RBP3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 TRAPPC2LQ9UL33 140 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 LRRC42Q9Y546 428 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 V9GY05 133 aa3.79□□□□□ -1.8
EXOSC3-204ENST00000465860 IGKV1D-8A0A087WSZ0 117 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 TRAV1-2A0A0B4J238 106 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 IGHV1-3A0A0C4DH29 117 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 A0A1B0GUS0 222 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 IFITM5A6NNB3 132 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 CCRL2O00421 344 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 TOR1AO14656 332 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 HSD17B6O14756 317 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 MRPS14O60783 128 aaKnown RBP3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 ARL6IP5O75915 188 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 OR2F2O95006 317 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 TNFAIP8O95379 198 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 CD3GP09693 182 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 UBBP0CG47 229 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 PSMA1P25786 263 aaKnown RBP3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 CNTFRP26992 372 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 FGF9P31371 208 aaPredicted RBP3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 PRRX1P54821 245 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 F2RL1P55085 397 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF816Q0VGE8 651 aaPredicted RBP3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 HERPUD1Q15011 391 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 TRAM1Q15629 374 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 HMGN3Q15651 99 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 RAB11BQ15907 218 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 ODF3L2Q3SX64 289 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 KCTD21Q4G0X4 260 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 ABCA11PQ4W5N1 156 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 MORN2Q502X0 79 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms