RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 HHLA2Q9UM44 414 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.32□□□□□ -2.2
SMC4-205ENST00000465563 CCDC88CQ9P219 2028 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 SDK1Q7Z5N4 2213 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 PTPRSQ13332 1948 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 GOLGA6L10A6NI86 522 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 STK16O75716 305 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 HBZP02008 142 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 SLC25A16P16260 332 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 CFL1P23528 166 aaKnown RBP1.31□□□□□ -2.2
SMC4-205ENST00000465563 NPPCP23582 126 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 F8A1P23610 371 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 OR10J1P30954 320 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 SNAP25P60880 206 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 HERVK_113P63121 156 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 SDHAF4Q5VUM1 108 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 DNM1P34Q6PK57 102 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 FAM19A5Q7Z5A7 132 aaPredicted RBP1.31□□□□□ -2.2
SMC4-205ENST00000465563 CD302Q8IX05 232 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 OR10D3Q8NH80 312 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 FNDC9Q8TBE3 224 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 C16orf78Q8WTQ4 265 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 TMBIM1Q969X1 311 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 TMEM208Q9BTX3 173 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 TTTY12Q9BZ98 90 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 NDEL1Q9GZM8 345 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 SLC22A4Q9H015 551 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 FAM206AQ9NX38 181 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 DNAJC12Q9UKB3 198 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 ALG5Q9Y673 324 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 HEATR5AQ86XA9 2040 aa1.31□□□□□ -2.2
SMC4-205ENST00000465563 WDR90Q96KV7 1748 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 IGHV3-15A0A0B4J1V0 119 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 TINCRA0A1B0GVN0 87 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 VPS37CA5D8V6 355 aaPredicted RBP1.3□□□□□ -2.2
SMC4-205ENST00000465563 ITGB1BP1O14713 200 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 AZIN1O14977 448 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 ZW10O43264 779 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 ATP8B1O43520 1251 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 CRYBA1P05813 215 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 HIST1H1CP16403 213 aaKnown RBP1.3□□□□□ -2.2
SMC4-205ENST00000465563 SMAGPQ0VAQ4 97 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 PDPK2PQ6A1A2 396 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 OR10A6Q8NH74 314 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 TLCD1Q96CP7 247 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 Q9BRP9 147 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 MROQ9BYG7 248 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 MS4A6AQ9H2W1 248 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 PARVAQ9NVD7 372 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 TXNL4BQ9NX01 149 aaKnown RBP1.3□□□□□ -2.2
SMC4-205ENST00000465563 SIPA1L1O43166 1804 aa1.3□□□□□ -2.2
SMC4-205ENST00000465563 EIF4G1Q04637 1599 aaKnown RBP1.3□□□□□ -2.2
SMC4-205ENST00000465563 A0A1W2PQL4 384 aaPredicted RBP1.29□□□□□ -2.2
SMC4-205ENST00000465563 SLC17A3O00476 420 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 COPEO14579 308 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 ATP6V1G2O95670 118 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 LINC00614P0C842 121 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 GZMBP10144 247 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 CRHBPP24387 322 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 CD79BP40259 229 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 SKP1P63208 163 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 TPRXLQ17RH7 258 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.29□□□□□ -2.2
SMC4-205ENST00000465563 ATP5L2Q7Z4Y8 100 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 FUNDC1Q8IVP5 155 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 NATD1Q8N6N6 113 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 CCDC112Q8NEF3 446 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 RNASE11Q8TAA1 199 aaKnown RBP1.29□□□□□ -2.2
SMC4-205ENST00000465563 SLC37A2Q8TED4 501 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 ASB13Q8WXK3 278 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 MBOAT7Q96N66 472 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 TXNDC17Q9BRA2 123 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 MND1Q9BWT6 205 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 UPF3BQ9BZI7 483 aaKnown RBP1.29□□□□□ -2.2
SMC4-205ENST00000465563 NKX6-2Q9C056 277 aaPredicted RBP1.29□□□□□ -2.2
SMC4-205ENST00000465563 EIF5A2Q9GZV4 153 aaKnown RBP1.29□□□□□ -2.2
SMC4-205ENST00000465563 A0A1W2PP64 1363 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
SMC4-205ENST00000465563 FREM1Q5H8C1 2179 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 A0A0G2JQZ4 141 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 OR5K4A6NMS3 321 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 H3BPC8 53 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 MRASO14807 208 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 COCHO43405 550 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 TRAPPC3O43617 180 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 HPGDSO60760 199 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 IGKV1-16P04430 117 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 OCMP0CE72 109 aaPredicted RBP1.28□□□□□ -2.2
SMC4-205ENST00000465563 PET100P0DJ07 73 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 CXCL2P19875 107 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 CXCL3P19876 107 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 ATP6V0CP27449 155 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 HPCAP84074 193 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 LGALS9BQ3B8N2 356 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 DNAL1Q4LDG9 190 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 C2orf91Q6ZV80 131 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 RNASE6Q93091 150 aaKnown RBP1.28□□□□□ -2.2
SMC4-205ENST00000465563 SMIM19Q96E16 107 aa1.28□□□□□ -2.2
SMC4-205ENST00000465563 CPNE2Q96FN4 548 aaPredicted RBP1.28□□□□□ -2.2
SMC4-205ENST00000465563 MGLLQ99685 303 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms