RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 BTBD17A6NE02 478 aa18.09■□□□□ 0.49
PDLIM2-216ENST00000464275 ATXN7O15265 892 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-216ENST00000464275 PRH1P02810 166 aa18.09■□□□□ 0.49
PDLIM2-216ENST00000464275 FBXL19-AS1Q494R0 122 aa18.09■□□□□ 0.49
PDLIM2-216ENST00000464275 ZNF585BQ52M93 769 aa18.09■□□□□ 0.49
PDLIM2-216ENST00000464275 RFESDQ8TAC1 157 aa18.09■□□□□ 0.49
PDLIM2-216ENST00000464275 EGLN1Q9GZT9 426 aa18.09■□□□□ 0.49
PDLIM2-216ENST00000464275 CCL21O00585 134 aa18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 IGKV1-39P01597 117 aa18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 IGKV1D-39P04432 117 aa18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 C1QTNF9P0C862 333 aa18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 POLR2GP62487 172 aaKnown RBP eCLIP18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 CXorf66Q5JRM2 361 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 FAM53AQ6NSI3 398 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 RNASE11Q8TAA1 199 aaKnown RBP18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 FAM216AQ8WUB2 273 aa18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 C14orf79Q96F83 325 aa18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 SCRT1Q9BWW7 348 aa18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 SAV1Q9H4B6 383 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 OR6C3Q9NZP0 311 aa18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 TLN1Q9Y490 2541 aaKnown RBP18.08■□□□□ 0.49
PDLIM2-216ENST00000464275 IGHV3-43A0A0B4J1X8 118 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 A0A0G2JRQ6 117 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 C9JQL5 133 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 IGHV3-43DP0DP04 118 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 CHRNB4P30926 498 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 PPT1P50897 306 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 VAMP2P63027 116 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 NHLH2Q02577 135 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 EIF4EBP1Q13541 118 aaPredicted RBP18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 TEX36Q5VZQ5 186 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 EDARADDQ8WWZ3 215 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 JPT1Q9UK76 154 aa18.08■□□□□ 0.48
PDLIM2-216ENST00000464275 SHISA9B4DS77 424 aa18.07■□□□□ 0.48
PDLIM2-216ENST00000464275 EDDM3BP56851 147 aa18.07■□□□□ 0.48
PDLIM2-216ENST00000464275 CATR1Q13166 79 aa18.07■□□□□ 0.48
PDLIM2-216ENST00000464275 RXFP4Q8TDU9 374 aa18.07■□□□□ 0.48
PDLIM2-216ENST00000464275 GNPNAT1Q96EK6 184 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-216ENST00000464275 ZNF665Q9H7R5 613 aa18.07■□□□□ 0.48
PDLIM2-216ENST00000464275 POLEQ07864 2286 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 CCL8P80075 99 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 TLE1Q04724 770 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 RNF212Q495C1 297 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 RNASE6Q93091 150 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 PLPPR2Q96GM1 343 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 C5orf30Q96GV9 206 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 GAFA1Q96PS6 74 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 FAM234AQ9H0X4 552 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 RAB9BQ9NP90 201 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 IGF2RP11717 2491 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 MEX3AA1L020 520 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 LRRC30A6NM36 301 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 COLCA2A8K830 154 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 F2RL2O00254 374 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 SSSCA1O60232 199 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 EPHA1P21709 976 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 NFYBP25208 207 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 ID4P47928 161 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 RHEBQ15382 184 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 ZNF788Q6ZQV5 615 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 ZNF808Q8N4W9 903 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 TCTEX1D1Q8N7M0 179 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 HSD17B11Q8NBQ5 300 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 EIF5A2Q9GZV4 153 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 MAGT1Q9H0U3 335 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 SLC35B3Q9H1N7 401 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 HIPK2Q9H2X6 1198 aa18.06■□□□□ 0.48
PDLIM2-216ENST00000464275 SPTBN4Q9H254 2564 aa18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 DIDO1Q9BTC0 2240 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 WRBO00258 174 aa18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 YPEL1O60688 119 aa18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 IFNA4P05014 189 aa18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 CRYBA1P05813 215 aa18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 CLEC9AQ6UXN8 241 aa18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 IQCF2Q8IXL9 164 aa18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 DMRTC2Q8IXT2 367 aaPredicted RBP18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 DEFB108BQ8NET1 73 aa18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 YPEL2Q96QA6 119 aa18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 USF3Q68DE3 2245 aa18.05■□□□□ 0.48
PDLIM2-216ENST00000464275 FAM24AA6NFZ4 105 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 FAM90A27PA6NNH2 459 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 IGKV1-5P01602 117 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 RAB5BP61020 215 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 MORN2Q502X0 79 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 ZNF66Q6ZN08 573 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 TMEM252Q8N6L7 170 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 UNKLQ9H9P5 680 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 PSG11Q9UQ72 335 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 IGSF23A1L1A6 192 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 DEFB108AA8MXU0 73 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 E7EQL1 145 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 CD3EP07766 207 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 CGB3P0DN86 165 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 CGB7P0DN87 165 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 LTC4SQ16873 150 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 DPPA3Q6W0C5 159 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 SH3BGRL3Q9H299 93 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 KCNJ16Q9NPI9 418 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 CALYQ9NYX4 217 aa18.04■□□□□ 0.48
PDLIM2-216ENST00000464275 GNG12Q9UBI6 72 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms