RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 FOXA2Q9Y261 457 aaPredicted RBP11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 AK6Q9Y3D8 172 aaKnown RBP11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 FBXO7Q9Y3I1 522 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 NUBP2Q9Y5Y2 271 aa11.15□□□□□ -0.62
SNRNP40-203ENST00000463988 H7C2Y5 167 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 HSMCR30P0CW71 290 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 RPS25P62851 125 aaKnown RBP11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 GNB1P62873 340 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 PLGLAQ15195 96 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 AKIRIN2Q53H80 203 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 PYHIN1Q6K0P9 492 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 PRSS48Q7RTY5 328 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 ZNF429Q86V71 674 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 OR56B1Q8NGI3 324 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 NRG4Q8WWG1 115 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 FAM3DQ96BQ1 224 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 ARHGAP5-AS1Q96IT6 56 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 HDHD3Q9BSH5 251 aaPredicted RBP11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 ACOT13Q9NPJ3 140 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 OR1A1Q9P1Q5 309 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 RNF150Q9ULK6 438 aa11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
SNRNP40-203ENST00000463988 ERICH4A6NGS2 130 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 FCN1O00602 326 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 LDLRAD4O15165 306 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 SOX15O60248 233 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 PROP1O75360 226 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 SPDEFO95238 335 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 SCTP09683 121 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 EGR2P11161 476 aaPredicted RBP11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 CRHBPP24387 322 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 CALRP27797 417 aaKnown RBP11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 VEGFCP49767 419 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 PSG5Q15238 335 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 GLDNQ6ZMI3 551 aaPredicted RBP11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 OR5B12Q96R08 314 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 TSNAXQ99598 290 aaKnown RBP11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 MGLLQ99685 303 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 CMSS1Q9BQ75 279 aaKnown RBP11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 PECRQ9BY49 303 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 TOLLIPQ9H0E2 274 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 ZNF221Q9UK13 617 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 V9GY05 133 aa11.13□□□□□ -0.63
SNRNP40-203ENST00000463988 A0A1W2PN81 502 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 TRDCB7Z8K6 153 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 ANKRD65E5RJM6 399 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 LINC01619G3V211 115 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 OVOL1O14753 267 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 LGALS1P09382 135 aaKnown RBP11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 CHRNA7P36544 502 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 SERPINB10P48595 397 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 FABP5Q01469 135 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 C2orf76Q3KRA6 126 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 PPP1R27Q86WC6 154 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 TPSG1Q9NRR2 321 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 METTL1Q9UBP6 276 aaKnown RBP11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 RAB22AQ9UL26 194 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 U3KQK5 164 aa11.12□□□□□ -0.63
SNRNP40-203ENST00000463988 IGKV1-6A0A0C4DH72 117 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 ARPC1BO15143 372 aaKnown RBP11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 DENRO43583 198 aaKnown RBP11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 DIRAS3O95661 229 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 TFAP2AP05549 437 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 CD40LGP29965 261 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 CLDN12P56749 244 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 ACTBL2Q562R1 376 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 PLAC9Q5JTB6 97 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 PDPNQ86YL7 162 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 ZNF383Q8NA42 475 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 DRAXINQ8NBI3 349 aaPredicted RBP11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 OR4A4PQ8NGN8 299 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 ABHD5Q8WTS1 349 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 CCDC90BQ9GZT6 254 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 SLA2Q9H6Q3 261 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 RDH8Q9NYR8 311 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 GAB2Q9UQC2 676 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 A3GALT2U3KPV4 340 aa11.11□□□□□ -0.63
SNRNP40-203ENST00000463988 TMEM272A0A1B0GTI8 110 aa11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 PDCD5O14737 125 aa11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 APOA2P02652 100 aa11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 RPS16P62249 146 aaKnown RBP11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 TBCEQ15813 527 aaPredicted RBP11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 UNQ5815/PRO19632Q6UWF5 114 aa11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 DLX4Q92988 240 aaPredicted RBP11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 FLYWCH2Q96CP2 140 aaKnown RBP11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 VCX3BQ9H321 246 aa11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 SMAD5-AS1Q9Y6J3 95 aa11.1□□□□□ -0.63
SNRNP40-203ENST00000463988 TRAV1-2A0A0B4J238 106 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 FABP7O15540 132 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 CA2P00918 260 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 CD3GP09693 182 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 MAP2K4P45985 399 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 LGALS7P47929 136 aa11.09□□□□□ -0.63
SNRNP40-203ENST00000463988 HSPA13P48723 471 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms