RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 FABP5Q01469 135 aa14.67□□□□□ -0.06
SF3A1-205ENST00000463818 ZNF660Q6AZW8 331 aaPredicted RBP14.67□□□□□ -0.06
SF3A1-205ENST00000463818 FAM3DQ96BQ1 224 aa14.67□□□□□ -0.06
SF3A1-205ENST00000463818 PECRQ9BY49 303 aa14.67□□□□□ -0.06
SF3A1-205ENST00000463818 SCOCQ9UIL1 159 aa14.67□□□□□ -0.06
SF3A1-205ENST00000463818 DNAH9Q9NYC9 4486 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 H7C2Y5 167 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 FCN1O00602 326 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 CX3CL1P78423 397 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 NDPQ00604 133 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 RUNX1Q01196 453 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 DCTN2Q13561 401 aaKnown RBP14.66□□□□□ -0.06
SF3A1-205ENST00000463818 PLGLAQ15195 96 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 KCTD21Q4G0X4 260 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 UBE2UQ5VVX9 321 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 OR56B1Q8NGI3 324 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 OR5AN1Q8NGI8 311 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 EDARADDQ8WWZ3 215 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 CMSS1Q9BQ75 279 aaKnown RBP14.66□□□□□ -0.06
SF3A1-205ENST00000463818 FBXO7Q9Y3I1 522 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 V9GY05 133 aa14.66□□□□□ -0.06
SF3A1-205ENST00000463818 PROP1O75360 226 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 RBBP9O75884 186 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 ECI1P42126 302 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 PSMD7P51665 324 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 ECSCRQ19T08 205 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 ZNF260Q3ZCT1 412 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 PLAC9Q5JTB6 97 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 SPARTQ8N0X7 666 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 DRAXINQ8NBI3 349 aaPredicted RBP14.65□□□□□ -0.06
SF3A1-205ENST00000463818 PTX4Q96A99 478 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 RNF5Q99942 180 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 C12orf4Q9NQ89 552 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 WASHC3Q9Y3C0 194 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 NUBP2Q9Y5Y2 271 aa14.65□□□□□ -0.06
SF3A1-205ENST00000463818 IGKV1-6A0A0C4DH72 117 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 LDLRAD4O15165 306 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 EGR2P11161 476 aaPredicted RBP14.64□□□□□ -0.07
SF3A1-205ENST00000463818 RANBP1P43487 201 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 LINC00205P59089 165 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 GNB1P62873 340 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 ZNF616Q08AN1 781 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 PLA2G7Q13093 441 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 C19orf54Q5BKX5 351 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 HES5Q5TA89 166 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 ASPHD1Q5U4P2 390 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 ZNF773Q6PK81 442 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 CD200R1LQ6Q8B3 271 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 FCGR1BQ92637 280 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 PRR25Q96S07 402 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 CLCC1Q96S66 551 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 NDUFB11Q9NX14 153 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 ZNF221Q9UK13 617 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 RAB22AQ9UL26 194 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 LSM4Q9Y4Z0 139 aaKnown RBP14.64□□□□□ -0.07
SF3A1-205ENST00000463818 A3GALT2U3KPV4 340 aa14.64□□□□□ -0.07
SF3A1-205ENST00000463818 TMEM272A0A1B0GTI8 110 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 A0A1W2PN81 502 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 TRDCB7Z8K6 153 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 SOX15O60248 233 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 OR8U8P0C7N1 319 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 GALP22466 123 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 CHRNA7P36544 502 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 CRIP2P52943 208 aaPredicted RBP14.63□□□□□ -0.07
SF3A1-205ENST00000463818 TMEM267Q0VDI3 215 aaPredicted RBP14.63□□□□□ -0.07
SF3A1-205ENST00000463818 PSG5Q15238 335 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 SSX1Q16384 188 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 ABHD5Q8WTS1 349 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 GAB2Q9UQC2 676 aa14.63□□□□□ -0.07
SF3A1-205ENST00000463818 FOXA2Q9Y261 457 aaPredicted RBP14.63□□□□□ -0.07
SF3A1-205ENST00000463818 SNRPBP14678 240 aaKnown RBP14.62□□□□□ -0.07
SF3A1-205ENST00000463818 RPS16P62249 146 aaKnown RBP14.62□□□□□ -0.07
SF3A1-205ENST00000463818 PPP1R27Q86WC6 154 aa14.62□□□□□ -0.07
SF3A1-205ENST00000463818 ZNF383Q8NA42 475 aa14.62□□□□□ -0.07
SF3A1-205ENST00000463818 CASTOR1Q8WTX7 329 aa14.62□□□□□ -0.07
SF3A1-205ENST00000463818 DCUN1D4Q92564 292 aa14.62□□□□□ -0.07
SF3A1-205ENST00000463818 ALX4Q9H161 411 aaPredicted RBP14.62□□□□□ -0.07
SF3A1-205ENST00000463818 RDH8Q9NYR8 311 aa14.62□□□□□ -0.07
SF3A1-205ENST00000463818 METTL1Q9UBP6 276 aaKnown RBP14.62□□□□□ -0.07
SF3A1-205ENST00000463818 KCNK7Q9Y2U2 307 aa14.62□□□□□ -0.07
SF3A1-205ENST00000463818 PDCD5O14737 125 aa14.61□□□□□ -0.07
SF3A1-205ENST00000463818 CD3GP09693 182 aa14.61□□□□□ -0.07
SF3A1-205ENST00000463818 MRPS15P82914 257 aaKnown RBP14.61□□□□□ -0.07
SF3A1-205ENST00000463818 ZNF562Q6V9R5 426 aa14.61□□□□□ -0.07
SF3A1-205ENST00000463818 TCTEX1D1Q8N7M0 179 aa14.61□□□□□ -0.07
SF3A1-205ENST00000463818 FAM103A1Q9BTL3 118 aaKnown RBP14.61□□□□□ -0.07
SF3A1-205ENST00000463818 TRAV1-2A0A0B4J238 106 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 IGKV1-16P04430 117 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 TFAP2AP05549 437 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 INSL3P51460 131 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 OR10A3P58181 314 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 MOGAT2Q3SYC2 334 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 AKIRIN2Q53H80 203 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 UNQ5815/PRO19632Q6UWF5 114 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 OR4A4PQ8NGN8 299 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 RAB3CQ96E17 227 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 TSNAXQ99598 290 aaKnown RBP14.6□□□□□ -0.07
SF3A1-205ENST00000463818 TOLLIPQ9H0E2 274 aa14.6□□□□□ -0.07
SF3A1-205ENST00000463818 SHISA3A0PJX4 238 aa14.59□□□□□ -0.07
SF3A1-205ENST00000463818 M0R1X1 148 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms