RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ACTBL2Q562R1 376 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 RPL39P5Q59GN2 51 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 CCBE1Q6UXH8 406 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-204ENST00000463487 C12orf54Q6X4T0 127 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 OR8H1Q8NGG4 311 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 OR2T6Q8NHC8 308 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 NABP2Q9BQ15 211 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 PRSS22Q9GZN4 317 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 EHFQ9NZC4 300 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 MOB4Q9Y3A3 225 aa15.86■□□□□ 0.13
COL9A3-204ENST00000463487 FABP12A6NFH5 140 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 GABARAPH6UMI1 98 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 M0R1X1 148 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 TSPAN9O75954 239 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 APOA2P02652 100 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 FCGR2CP31995 323 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 TNFSF8P32971 234 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 COMPP49747 757 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-204ENST00000463487 HERV-K104P61576 105 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 SSBP1Q04837 148 aaKnown RBP15.85■□□□□ 0.13
COL9A3-204ENST00000463487 CBX3Q13185 183 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 EBI3Q14213 229 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 ARSJQ5FYB0 599 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-204ENST00000463487 ZNF645Q8N7E2 425 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 BORCS5Q969J3 196 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 ABHD1Q96SE0 405 aa15.85■□□□□ 0.13
COL9A3-204ENST00000463487 CTDSPLO15194 276 aa15.84■□□□□ 0.13
COL9A3-204ENST00000463487 TBPP20226 339 aa15.84■□□□□ 0.13
COL9A3-204ENST00000463487 TAGLNQ01995 201 aaKnown RBP15.84■□□□□ 0.13
COL9A3-204ENST00000463487 C11orf88Q6PI97 169 aa15.84■□□□□ 0.13
COL9A3-204ENST00000463487 ADTRPQ96IZ2 230 aa15.84■□□□□ 0.13
COL9A3-204ENST00000463487 EAF1Q96JC9 268 aaPredicted RBP15.84■□□□□ 0.13
COL9A3-204ENST00000463487 ZNF251Q9BRH9 671 aa15.84■□□□□ 0.13
COL9A3-204ENST00000463487 C16orf95Q9H693 158 aa15.84■□□□□ 0.13
COL9A3-204ENST00000463487 MMP24Q9Y5R2 645 aa15.84■□□□□ 0.13
COL9A3-204ENST00000463487 ZNF736B4DX44 427 aaPredicted RBP15.83■□□□□ 0.12
COL9A3-204ENST00000463487 H7C2Y5 167 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 TUSC2O75896 110 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 PPYP01298 95 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 HLA-DMAP28067 261 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 HRH1P35367 487 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 DYRK1AQ13627 763 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 HNF4GQ14541 408 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 AWAT1Q58HT5 328 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 RNASE12Q5GAN4 147 aaKnown RBP15.83■□□□□ 0.12
COL9A3-204ENST00000463487 FAM131AQ6UXB0 335 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 Q6ZSV7 163 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 OVCH2Q7RTZ1 564 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 OR52I2Q8NH67 350 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 GIMAP1Q8WWP7 306 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 SDHAF2Q9NX18 166 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 MTFP1Q9UDX5 166 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 WASHC3Q9Y3C0 194 aa15.83■□□□□ 0.12
COL9A3-204ENST00000463487 CLPSL1A2RUU4 121 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 NCBP2LA6PVI3 153 aaKnown RBP15.82■□□□□ 0.12
COL9A3-204ENST00000463487 FGF16O43320 207 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 PMP2P02689 132 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 CT45A6P0DMU7 189 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 CT45A5P0DMU8 189 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 CT45A7P0DMV0 189 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 THBS3P49746 956 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 TSPAN5P62079 268 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 RELBQ01201 579 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 SPANXN2Q5MJ10 180 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 TMEM17Q86X19 198 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 OR6F1Q8NGZ6 308 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 SPATA3Q8NHX4 192 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 SMIM4Q8WVI0 70 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 BATF3Q9NR55 127 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 TAS2R8Q9NYW2 309 aa15.82■□□□□ 0.12
COL9A3-204ENST00000463487 ZNF107Q9UII5 783 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-204ENST00000463487 H0YJW9 148 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 J3QRK9 145 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 PEX14O75381 377 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 IFNA6P05013 189 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 MDKP21741 143 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-204ENST00000463487 AADACP22760 399 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 RFX2P48378 723 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 TAS2R19P59542 299 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 MSMO1Q15800 293 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 RTL8BQ17RB0 113 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 RNASE10Q5GAN6 216 aaKnown RBP15.81■□□□□ 0.12
COL9A3-204ENST00000463487 PDPNQ86YL7 162 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 C3orf56Q8N813 242 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 OR5AN1Q8NGI8 311 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 SECTM1Q8WVN6 248 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 KIAA1456Q9P272 454 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 KLK11Q9UBX7 282 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 RNF114Q9Y508 228 aa15.81■□□□□ 0.12
COL9A3-204ENST00000463487 CSF1P09603 554 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 RRASP10301 218 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 PTBP1P26599 531 aaKnown RBP eCLIP15.8■□□□□ 0.12
COL9A3-204ENST00000463487 FXYD4P59646 89 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 DGCR2P98153 550 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 MMDQ15546 238 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 DHRS11Q6UWP2 260 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 LYSMD2Q8IV50 215 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 Q8N6K4 173 aa15.8■□□□□ 0.12
COL9A3-204ENST00000463487 DRAXINQ8NBI3 349 aaPredicted RBP15.8■□□□□ 0.12
COL9A3-204ENST00000463487 ZBTB34Q8NCN2 500 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms