RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 RNF167Q9H6Y7 350 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 ZNF230Q9UIE0 474 aaPredicted RBP12.78□□□□□ -0.36
COL1A1-202ENST00000463440 WASHC3Q9Y3C0 194 aa12.78□□□□□ -0.36
COL1A1-202ENST00000463440 TRBV6-7A0A0A0MS04 114 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 NUDT19A8MXV4 375 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 H0YJW9 148 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 NDUFA3O95167 84 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 HLA-DRB1P01911 266 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 IGF1P05019 195 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 GSTP1P09211 210 aaKnown RBP12.77□□□□□ -0.37
COL1A1-202ENST00000463440 CLEC2LP0C7M8 214 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 OR5H8P0DN80 308 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 DTYMKP23919 212 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 CNTFRP26992 372 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 SLC6A1P30531 599 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 C5orf64Q2M2E5 130 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 BEAN1Q3B7T3 259 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 LIN54Q6MZP7 749 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 GLDNQ6ZMI3 551 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-202ENST00000463440 Q6ZS49 121 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-202ENST00000463440 WFDC9Q8NEX5 89 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 OR5AN1Q8NGI8 311 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 GINS4Q9BRT9 223 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 ZNF580Q9UK33 172 aa12.77□□□□□ -0.37
COL1A1-202ENST00000463440 TFAP2AP05549 437 aa12.76□□□□□ -0.37
COL1A1-202ENST00000463440 ELANEP08246 267 aa12.76□□□□□ -0.37
COL1A1-202ENST00000463440 PITPNAQ00169 270 aa12.76□□□□□ -0.37
COL1A1-202ENST00000463440 FOXE3Q13461 319 aa12.76□□□□□ -0.37
COL1A1-202ENST00000463440 CXorf66Q5JRM2 361 aaPredicted RBP12.76□□□□□ -0.37
COL1A1-202ENST00000463440 IDNKQ5T6J7 187 aa12.76□□□□□ -0.37
COL1A1-202ENST00000463440 HACD4Q5VWC8 232 aa12.76□□□□□ -0.37
COL1A1-202ENST00000463440 DRAXINQ8NBI3 349 aaPredicted RBP12.76□□□□□ -0.37
COL1A1-202ENST00000463440 RNF5Q99942 180 aa12.76□□□□□ -0.37
COL1A1-202ENST00000463440 RHBDL2Q9NX52 303 aa12.76□□□□□ -0.37
COL1A1-202ENST00000463440 RBM7Q9Y580 266 aaKnown RBP12.76□□□□□ -0.37
COL1A1-202ENST00000463440 ETV7Q9Y603 341 aa12.76□□□□□ -0.37
COL1A1-202ENST00000463440 NOTCH3Q9UM47 2321 aa12.76□□□□□ -0.37
COL1A1-202ENST00000463440 M0R1X1 148 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 RRHO14718 337 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 TMEM127O75204 238 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 PROP1O75360 226 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 APOA2P02652 100 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 OR8U9P0C7N5 309 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 PLGLAQ15195 96 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 OXLD1Q5BKU9 147 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 KPRPQ5T749 579 aaPredicted RBP12.75□□□□□ -0.37
COL1A1-202ENST00000463440 KLHL30-AS1Q8NEE0 82 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 OR8U1Q8NH10 309 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 ST6GALNAC5Q9BVH7 336 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 OR2D2Q9H210 308 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 DCSTAMPQ9H295 470 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 OR51J1Q9H342 316 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 ELF5Q9UKW6 265 aaPredicted RBP12.75□□□□□ -0.37
COL1A1-202ENST00000463440 GAB2Q9UQC2 676 aa12.75□□□□□ -0.37
COL1A1-202ENST00000463440 IGHV7-81A0A0B4J1V7 117 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 TMEM235A6NFC5 223 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 AIREO43918 545 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 IGHG4P01861 327 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 RPLP1P05386 114 aaKnown RBP12.74□□□□□ -0.37
COL1A1-202ENST00000463440 GNG2P59768 71 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 CFHR3Q02985 330 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 ZNF260Q3ZCT1 412 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 PDPNQ86YL7 162 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 CROCCP3Q8IVE0 287 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 ZNF695Q8IW36 515 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 RNF152Q8N8N0 203 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 ZNF383Q8NA42 475 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 TSNAXQ99598 290 aaKnown RBP12.74□□□□□ -0.37
COL1A1-202ENST00000463440 FBXL15Q9H469 300 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 PARP11Q9NR21 331 aa12.74□□□□□ -0.37
COL1A1-202ENST00000463440 ATP6V0E1O15342 81 aa12.73□□□□□ -0.37
COL1A1-202ENST00000463440 CTXN2P0C2S0 81 aa12.73□□□□□ -0.37
COL1A1-202ENST00000463440 MYCNOSP40205 109 aa12.73□□□□□ -0.37
COL1A1-202ENST00000463440 THBS3P49746 956 aa12.73□□□□□ -0.37
COL1A1-202ENST00000463440 RPS16P62249 146 aaKnown RBP12.73□□□□□ -0.37
COL1A1-202ENST00000463440 ZNF660Q6AZW8 331 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-202ENST00000463440 C18orf65Q6ZTR6 163 aa12.73□□□□□ -0.37
COL1A1-202ENST00000463440 C8orf86Q6ZUL3 223 aa12.73□□□□□ -0.37
COL1A1-202ENST00000463440 H1FOOQ8IZA3 346 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-202ENST00000463440 OR5H6Q8NGV6 325 aa12.73□□□□□ -0.37
COL1A1-202ENST00000463440 NUDCD2Q8WVJ2 157 aa12.73□□□□□ -0.37
COL1A1-202ENST00000463440 YIPF6Q96EC8 236 aa12.73□□□□□ -0.37
COL1A1-202ENST00000463440 RCC1LQ96I51 464 aaKnown RBP12.73□□□□□ -0.37
COL1A1-202ENST00000463440 SDHAF2Q9NX18 166 aa12.73□□□□□ -0.37
COL1A1-202ENST00000463440 IGKV1D-8A0A087WSZ0 117 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 A0A0A6YYH2 397 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 TRAV41A0A0B4J266 112 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 A6NJ64 397 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 SPDEFO95238 335 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 DUS4LO95620 317 aaKnown RBP12.72□□□□□ -0.37
COL1A1-202ENST00000463440 IGLL1P15814 213 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 CDX1P47902 265 aaPredicted RBP12.72□□□□□ -0.37
COL1A1-202ENST00000463440 TAGLNQ01995 201 aaKnown RBP12.72□□□□□ -0.37
COL1A1-202ENST00000463440 CBX3Q13185 183 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 TMEM65Q6PI78 240 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 ETV3LQ6ZN32 361 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 LCNL1Q6ZST4 164 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 LINC00482Q8N8I6 264 aa12.72□□□□□ -0.37
COL1A1-202ENST00000463440 FLYWCH2Q96CP2 140 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms