RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 DAD1P61803 113 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 GNG11P61952 73 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 APOFQ13790 326 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 GNA13Q14344 377 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 CCDC153Q494R4 210 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 C8orf74Q6P047 294 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 HMGN2P46Q86SG4 172 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 FER1L6-AS1Q8NA97 138 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 CDC26Q8NHZ8 85 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 SLC35B4Q969S0 331 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 UBE2WQ96B02 151 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 TLCD1Q96CP7 247 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 OR51I1Q9H343 314 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 PRELID1Q9Y255 219 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 U3KQK5 164 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.27□□□□□ -2.05
USH2A-203ENST00000463147 TOP2BQ02880 1626 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 EFCAB5A4FU69 1503 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 EHBP1L1Q8N3D4 1523 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 SHANK2Q9UPX8 1470 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 RGS12O14924 1447 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 CRB1P82279 1406 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 UHRF1BP1Q6BDS2 1440 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 IGHV3OR15-7A0A075B7D8 119 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 TGIF2-C20orf24A0A0A6YYL0 155 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 A0A0B4J2C4 111 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 VPS37CA5D8V6 355 aaPredicted RBP2.26□□□□□ -2.05
USH2A-203ENST00000463147 KCNK1O00180 336 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 MRASO14807 208 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 TRAPPC3O43617 180 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 CRYBA1P05813 215 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 PFN1P07737 140 aaKnown RBP2.26□□□□□ -2.05
USH2A-203ENST00000463147 OR12D1P0DN82 309 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 GABRA3P34903 492 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 TCL1AP56279 114 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 HERVK_113P63121 156 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 MRPS25P82663 173 aaKnown RBP2.26□□□□□ -2.05
USH2A-203ENST00000463147 RSU1Q15404 277 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 LY6EQ16553 131 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 LRRC75BQ2VPJ9 315 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 LPCAT4Q643R3 524 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 OR10K2Q6IF99 312 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 SFXN4Q6P4A7 337 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 TNFAIP8L2Q6P589 184 aaPredicted RBP2.26□□□□□ -2.05
USH2A-203ENST00000463147 LRP11Q86VZ4 500 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 ZBTB8OSQ8IWT0 167 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 ZNF721Q8TF20 911 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 TMBIM1Q969X1 311 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 CCDC42Q96M95 316 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 OR7D2Q96RA2 312 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 ZNF2Q9BSG1 426 aaPredicted RBP2.26□□□□□ -2.05
USH2A-203ENST00000463147 LRRC19Q9H756 370 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 PARVBQ9HBI1 364 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 MARCOQ9UEW3 520 aaPredicted RBP2.26□□□□□ -2.05
USH2A-203ENST00000463147 RPUSD1Q9UJJ7 312 aaKnown RBP2.26□□□□□ -2.05
USH2A-203ENST00000463147 DKKL1Q9UK85 242 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 ZNF443Q9Y2A4 671 aaPredicted RBP2.26□□□□□ -2.05
USH2A-203ENST00000463147 CLTCL1P53675 1640 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 MBD5Q9P267 1494 aa2.26□□□□□ -2.05
USH2A-203ENST00000463147 PIK3C2GO75747 1445 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 ERBINQ96RT1 1412 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 YTHDC2Q9H6S0 1430 aaKnown RBP2.25□□□□□ -2.05
USH2A-203ENST00000463147 KIF24Q5T7B8 1368 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 LAMC3Q9Y6N6 1575 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 TEX50A0A1B0GTY4 177 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 A0A1W2PQL4 384 aaPredicted RBP2.25□□□□□ -2.05
USH2A-203ENST00000463147 LEUTXA8MZ59 168 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 K7EQS6 105 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 COPEO14579 308 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 ACOX3O15254 700 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 GPR75O95800 540 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 FAM107AO95990 144 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 TNNC2P02585 160 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 TCRBP04435 133 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 CTXN2P0C2S0 81 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 HIST1H1EP10412 219 aaKnown RBP2.25□□□□□ -2.05
USH2A-203ENST00000463147 RPS24P62847 133 aaKnown RBP2.25□□□□□ -2.05
USH2A-203ENST00000463147 SLC35A2P78381 396 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 JOSD1Q15040 202 aaPredicted RBP2.25□□□□□ -2.05
USH2A-203ENST00000463147 NDUFA5Q16718 116 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 SAPCD1Q5SSQ6 148 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 RASSF6Q6ZTQ3 369 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 NATD1Q8N6N6 113 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 OR51H1Q8NH63 302 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 YIPF5Q969M3 257 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 RMI2Q96E14 147 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 PYURFQ96I23 114 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 LINC00477Q96M19 166 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 CGREF1Q99674 301 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 C1orf50Q9BV19 199 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 RSPO3Q9BXY4 272 aaPredicted RBP2.25□□□□□ -2.05
USH2A-203ENST00000463147 MED28Q9H204 178 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 OR51V1Q9H2C8 321 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 TRIM45Q9H8W5 580 aaPredicted RBP2.25□□□□□ -2.05
USH2A-203ENST00000463147 KCNIP2Q9NS61 270 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 ARHGEF12Q9NZN5 1544 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 TRPM3Q9HCF6 1732 aaPredicted RBP2.25□□□□□ -2.05
USH2A-203ENST00000463147 ITSN2Q9NZM3 1697 aa2.25□□□□□ -2.05
USH2A-203ENST00000463147 GPR179Q6PRD1 2367 aa2.24□□□□□ -2.05
USH2A-203ENST00000463147 IGLV2-18A0A075B6J9 118 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms