RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 RFESDQ8TAC1 157 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 IL22RA2Q969J5 263 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 SPIN2AQ99865 258 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 SPIN2BQ9BPZ2 258 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 IGHV3-43A0A0B4J1X8 118 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 C15orf65H3BRN8 121 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 ADAM20O43506 726 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 MED6O75586 246 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 SERPINE2P07093 398 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 WNT2P09544 360 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 SFTA3P0C7M3 94 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 IGHV3-43DP0DP04 118 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 NFYBP25208 207 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 EDDM3BP56851 147 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 ITLN2Q8WWU7 325 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-213ENST00000462730 EGLN1Q9GZT9 426 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 TOLLIPQ9H0E2 274 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 OR2D2Q9H210 308 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 RNF150Q9ULK6 438 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 ROS1P08922 2347 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 CFAP46Q8IYW2 2715 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 ARID1AO14497 2285 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 CACNA1BQ00975 2339 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 DEFB108AA8MXU0 73 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 ST8SIA5O15466 376 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 CLDN14O95500 239 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 GYPAP02724 150 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 HKR1P10072 659 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 SPP1P10451 314 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 ZNF16P17020 682 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-213ENST00000462730 LTC4SQ16873 150 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 DUX4L9Q6RFH8 374 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-213ENST00000462730 ZNF808Q8N4W9 903 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-213ENST00000462730 ZNF561Q8N587 486 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 ZNF645Q8N7E2 425 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 RXFP4Q8TDU9 374 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 SDSLQ96GA7 329 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 GAFA1Q96PS6 74 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 SMCO4Q9NRQ5 59 aa12.04□□□□□ -0.48
HDAC6-213ENST00000462730 RCL1Q9Y2P8 373 aaKnown RBP12.04□□□□□ -0.48
HDAC6-213ENST00000462730 LRRC30A6NM36 301 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 RNASEK-C17orf49H0YIS7 233 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 CRYBA1P05813 215 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 VDAC1P21796 283 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 RPL12P30050 165 aaKnown RBP12.03□□□□□ -0.48
HDAC6-213ENST00000462730 APOBEC3AP31941 199 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-213ENST00000462730 SULT1A2P50226 295 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 NMSQ5H8A3 153 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 C14orf79Q96F83 325 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 RBM14Q96PK6 669 aaKnown RBP12.03□□□□□ -0.48
HDAC6-213ENST00000462730 CCL13Q99616 98 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 DYNLRB1Q9NP97 96 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 LIN7CQ9NUP9 197 aaKnown RBP12.03□□□□□ -0.48
HDAC6-213ENST00000462730 CISD1Q9NZ45 108 aaKnown RBP12.03□□□□□ -0.48
HDAC6-213ENST00000462730 DYSFO75923 2080 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 E5RGE8 158 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 ST8SIA3O43173 380 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 CD5P06127 495 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 LOXP28300 417 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-213ENST00000462730 HTD2P86397 168 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 PEA15Q15121 130 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 EFNB3Q15768 340 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 TEX36Q5VZQ5 186 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 ARL6IP6Q8N6S5 226 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 C5orf30Q96GV9 206 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 ZNF665Q9H7R5 613 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 NSG2Q9Y328 171 aa12.03□□□□□ -0.48
HDAC6-213ENST00000462730 RAI1Q7Z5J4 1906 aaPredicted RBP12.02□□□□□ -0.48
HDAC6-213ENST00000462730 RNF212BA8MTL3 300 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 GZMHP20718 246 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 BTNL8Q6UX41 500 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 COMMD1Q8N668 190 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 FAM216BQ8N7L0 139 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 ZBTB34Q8NCN2 500 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 TUBA4BQ9H853 241 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 PLEKHF2Q9H8W4 249 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 PLEKHA2Q9HB19 425 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 PARP11Q9NR21 331 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 PKDREJQ9NTG1 2253 aa12.02□□□□□ -0.49
HDAC6-213ENST00000462730 C1orf196B1AJZ1 125 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 B9A039 149 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 AGAP20933 346 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 EPHA1P21709 976 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 NKX2-1P43699 371 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-213ENST00000462730 F2RL1P55085 397 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 CR1LQ2VPA4 569 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 ZNF672Q499Z4 452 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-213ENST00000462730 ZNF788Q6ZQV5 615 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 RNASE11Q8TAA1 199 aaKnown RBP12.01□□□□□ -0.49
HDAC6-213ENST00000462730 C2CD4CQ8TF44 421 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 OR6C3Q9NZP0 311 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 PSG11Q9UQ72 335 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 A0A0G2JRQ6 117 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 CLEC18AA5D8T8 446 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 NKX6-3A6NJ46 265 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 FAM157AC9JC47 383 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 UBE2CO00762 179 aa12.01□□□□□ -0.49
HDAC6-213ENST00000462730 AGPAT2O15120 278 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms