RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 RPL36ALQ969Q0 106 aaKnown RBP3.8□□□□□ -1.8
CSMD3-205ENST00000462254 FAM3DQ96BQ1 224 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 OR2V2Q96R30 315 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 SLC6A7Q99884 636 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 DHRS9Q9BPW9 319 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 UQCC2Q9BRT2 126 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 NICN1Q9BSH3 213 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 RTL8AQ9BWD3 113 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 OR51I2Q9H344 312 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 ABCB9Q9NP78 766 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 TMEM100Q9NV29 134 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 ABRACLQ9P1F3 81 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 SLC7A11Q9UPY5 501 aa3.8□□□□□ -1.8
CSMD3-205ENST00000462254 AKAP6Q13023 2319 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 USF3Q68DE3 2245 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 A0A0A6YYD4 124 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 PLSCR5A0PG75 271 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 TMEM210A6NLX4 147 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 SERPINE3A8MV23 424 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 SNURFLB1AK76 121 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 J3QT63 122 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 M0R233 179 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 CDIPTO14735 213 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 OR2J3O76001 311 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 CD8AP01732 235 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 SERPINE2P07093 398 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 CD55P08174 381 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 SOD3P08294 240 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 MGMTP16455 207 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 BCL3P20749 454 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 SERPINA2P20848 420 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 PMELP40967 661 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 NPBWR2P48146 333 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 EVX1P49640 407 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 ERVK11-1P61568 191 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 CCL8P80075 99 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF79Q15937 498 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 MOGAT2Q3SYC2 334 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 SLC22A6Q4U2R8 563 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 UBE2NLQ5JXB2 153 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 C10orf25Q5T742 122 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 CNIH2Q6PI25 160 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 HAGHLQ6PII5 290 aaPredicted RBP3.79□□□□□ -1.8
CSMD3-205ENST00000462254 ATRAIDQ6UW56 229 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 BTNL3Q6UXE8 466 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 WDR82Q6UXN9 313 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 Q6ZVQ6 151 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 SLC25A26Q70HW3 274 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 LRRC28Q86X40 367 aaPredicted RBP3.79□□□□□ -1.8
CSMD3-205ENST00000462254 FBXL14Q8N1E6 418 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 MUC15Q8N387 334 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 SAMD12Q8N8I0 201 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 PRR26Q8N8Z3 221 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 PXT1Q8NFP0 134 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 OR4M1Q8NGD0 313 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 OR9G4Q8NGQ1 327 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 OR51F2Q8NH61 342 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 AP3S1Q92572 193 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF488Q96MN9 340 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 TSC22D3Q99576 134 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 MICU1Q9BPX6 476 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 SLC22A4Q9H015 551 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 LPAR5Q9H1C0 372 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 TLNRD1Q9H1K6 362 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 ABCG5Q9H222 651 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 BANF2Q9H503 90 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 CBLN4Q9NTU7 201 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 RHBDL2Q9NX52 303 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 IL36GQ9NZH8 169 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF581Q9P0T4 197 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 ZNF221Q9UK13 617 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 KCNS2Q9ULS6 477 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 ING4Q9UNL4 249 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 NOP16Q9Y3C1 178 aaKnown RBP3.79□□□□□ -1.8
CSMD3-205ENST00000462254 V9GYH0 126 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 MYO18BQ8IUG5 2567 aa3.79□□□□□ -1.8
CSMD3-205ENST00000462254 ARID1AO14497 2285 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 ABCA2Q9BZC7 2435 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 TRAV6A0A075B6T7 132 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 IGLV5-52A0A0A0MRZ9 124 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 RPS10-NUDT3A0A1W2PQS6 291 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 FOXI3A8MTJ6 420 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 FAM25AB3EWG3 89 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 FAM25CB3EWG5 89 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 FAM25GB3EWG6 89 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 SRRM5B3KS81 715 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 TRAPPC2LH3BP13 241 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 J3QRK9 145 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 ATP6V0E1O15342 81 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 SOCS1O15524 211 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 NOS1APO75052 506 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 CRTAPO75718 401 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 TMEM50AO95807 157 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 UBBP0CG47 229 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 PGA5P0DJD9 388 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 PTHLHP12272 177 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 CDK2P24941 298 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 HOXD3P31249 432 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 S100A5P33763 92 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms