RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 ETV7Q9Y603 341 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 RGS11O94810 467 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 CNTFRP26992 372 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 SOX6P35712 828 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 RPL23AP62750 156 aaKnown RBP13.74□□□□□ -0.21
MRPL28-207ENST00000461550 RGS21Q2M5E4 152 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 LCNL1Q6ZST4 164 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 CENPSQ8N2Z9 138 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 FAM71E2Q8N5Q1 922 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 RITA1Q96K30 269 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 NABP2Q9BQ15 211 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 SLIRPQ9GZT3 109 aaKnown RBP13.74□□□□□ -0.21
MRPL28-207ENST00000461550 OR1A1Q9P1Q5 309 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 COMMD3Q9UBI1 195 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 KCNK7Q9Y2U2 307 aa13.74□□□□□ -0.21
MRPL28-207ENST00000461550 AP4M1O00189 453 aa13.73□□□□□ -0.21
MRPL28-207ENST00000461550 TMEM127O75204 238 aa13.73□□□□□ -0.21
MRPL28-207ENST00000461550 SCAND1P57086 179 aa13.73□□□□□ -0.21
MRPL28-207ENST00000461550 SLC35B1P78383 322 aa13.73□□□□□ -0.21
MRPL28-207ENST00000461550 MMDQ15546 238 aa13.73□□□□□ -0.21
MRPL28-207ENST00000461550 ZNF833PQ6ZTB9 187 aa13.73□□□□□ -0.21
MRPL28-207ENST00000461550 MOB1BQ7L9L4 216 aa13.73□□□□□ -0.21
MRPL28-207ENST00000461550 SAMD12Q8N8I0 201 aa13.73□□□□□ -0.21
MRPL28-207ENST00000461550 SLC23A1Q9UHI7 598 aa13.73□□□□□ -0.21
MRPL28-207ENST00000461550 ELF5Q9UKW6 265 aaPredicted RBP13.73□□□□□ -0.21
MRPL28-207ENST00000461550 NUDT19A8MXV4 375 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 SCTP09683 121 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 HLA-DRB3P79483 266 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 ZNF846Q147U1 533 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 CDNFQ49AH0 187 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 RPL39P5Q59GN2 51 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 ETV3LQ6ZN32 361 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 C8orf86Q6ZUL3 223 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 OR8H1Q8NGG4 311 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 S100ZQ8WXG8 99 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 KCTD12Q96CX2 325 aaKnown RBP13.72□□□□□ -0.21
MRPL28-207ENST00000461550 ABHD14BQ96IU4 210 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 CMSS1Q9BQ75 279 aaKnown RBP13.72□□□□□ -0.21
MRPL28-207ENST00000461550 C12orf4Q9NQ89 552 aa13.72□□□□□ -0.21
MRPL28-207ENST00000461550 TRBV6-6A0A0A6YYG2 114 aa13.71□□□□□ -0.21
MRPL28-207ENST00000461550 MFNGO00587 321 aa13.71□□□□□ -0.21
MRPL28-207ENST00000461550 HIST1H1DP16402 221 aaKnown RBP13.71□□□□□ -0.21
MRPL28-207ENST00000461550 ACTBP60709 375 aa13.71□□□□□ -0.21
MRPL28-207ENST00000461550 UBE2NLQ5JXB2 153 aa13.71□□□□□ -0.21
MRPL28-207ENST00000461550 LY6G6FQ5SQ64 297 aa13.71□□□□□ -0.21
MRPL28-207ENST00000461550 KLHL30-AS1Q8NEE0 82 aa13.71□□□□□ -0.21
MRPL28-207ENST00000461550 WDR12Q9GZL7 423 aaKnown RBP13.71□□□□□ -0.21
MRPL28-207ENST00000461550 RIMS4Q9H426 269 aaPredicted RBP13.71□□□□□ -0.21
MRPL28-207ENST00000461550 Q9N2K0 584 aa13.71□□□□□ -0.21
MRPL28-207ENST00000461550 TRAV18A0A075B6X5 111 aa13.7□□□□□ -0.22
MRPL28-207ENST00000461550 RPLP1P05386 114 aaKnown RBP13.7□□□□□ -0.22
MRPL28-207ENST00000461550 CD3GP09693 182 aa13.7□□□□□ -0.22
MRPL28-207ENST00000461550 ARFRP1Q13795 201 aa13.7□□□□□ -0.22
MRPL28-207ENST00000461550 FAM131AQ6UXB0 335 aa13.7□□□□□ -0.22
MRPL28-207ENST00000461550 GLDNQ6ZMI3 551 aaPredicted RBP13.7□□□□□ -0.22
MRPL28-207ENST00000461550 MCFD2Q8NI22 146 aa13.7□□□□□ -0.22
MRPL28-207ENST00000461550 AP3S1Q92572 193 aa13.7□□□□□ -0.22
MRPL28-207ENST00000461550 DUX3Q96PT4 197 aa13.7□□□□□ -0.22
MRPL28-207ENST00000461550 ZNF251Q9BRH9 671 aa13.7□□□□□ -0.22
MRPL28-207ENST00000461550 NXF2Q9GZY0 626 aaKnown RBP13.7□□□□□ -0.22
MRPL28-207ENST00000461550 ZNF107Q9UII5 783 aaPredicted RBP13.7□□□□□ -0.22
MRPL28-207ENST00000461550 HSPA12AO43301 675 aa13.69□□□□□ -0.22
MRPL28-207ENST00000461550 HPGDSO60760 199 aa13.69□□□□□ -0.22
MRPL28-207ENST00000461550 EIF4EP06730 217 aaKnown RBP13.69□□□□□ -0.22
MRPL28-207ENST00000461550 CEACAM6P40199 344 aa13.69□□□□□ -0.22
MRPL28-207ENST00000461550 MRPS15P82914 257 aaKnown RBP13.69□□□□□ -0.22
MRPL28-207ENST00000461550 TEX38Q6PEX7 206 aa13.69□□□□□ -0.22
MRPL28-207ENST00000461550 MRPL41Q8IXM3 137 aaKnown RBP13.69□□□□□ -0.22
MRPL28-207ENST00000461550 LINC00482Q8N8I6 264 aa13.69□□□□□ -0.22
MRPL28-207ENST00000461550 ACOT12Q8WYK0 555 aa13.69□□□□□ -0.22
MRPL28-207ENST00000461550 S100A16Q96FQ6 103 aaKnown RBP13.69□□□□□ -0.22
MRPL28-207ENST00000461550 NEURL2Q9BR09 285 aa13.69□□□□□ -0.22
MRPL28-207ENST00000461550 DIABLOQ9NR28 239 aa13.69□□□□□ -0.22
MRPL28-207ENST00000461550 NECAP2Q9NVZ3 263 aa13.69□□□□□ -0.22
MRPL28-207ENST00000461550 AURKAIP1Q9NWT8 199 aaPredicted RBP13.69□□□□□ -0.22
MRPL28-207ENST00000461550 IGKV1-6A0A0C4DH72 117 aa13.68□□□□□ -0.22
MRPL28-207ENST00000461550 RAB29O14966 203 aa13.68□□□□□ -0.22
MRPL28-207ENST00000461550 SCGNO76038 276 aa13.68□□□□□ -0.22
MRPL28-207ENST00000461550 PNLIPRP3Q17RR3 467 aa13.68□□□□□ -0.22
MRPL28-207ENST00000461550 ZNF260Q3ZCT1 412 aa13.68□□□□□ -0.22
MRPL28-207ENST00000461550 MZT2AQ6P582 158 aa13.68□□□□□ -0.22
MRPL28-207ENST00000461550 COMMD1Q8N668 190 aa13.68□□□□□ -0.22
MRPL28-207ENST00000461550 C6orf62Q9GZU0 229 aaPredicted RBP13.68□□□□□ -0.22
MRPL28-207ENST00000461550 C11orf54Q9H0W9 315 aaPredicted RBP13.68□□□□□ -0.22
MRPL28-207ENST00000461550 PIPOXQ9P0Z9 390 aa13.68□□□□□ -0.22
MRPL28-207ENST00000461550 RNF150Q9ULK6 438 aa13.68□□□□□ -0.22
MRPL28-207ENST00000461550 TMEM235A6NFC5 223 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 BOLA2-SMG1P6H3BVE0 249 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 NBR2O15453 112 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 CT45A6P0DMU7 189 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 CT45A5P0DMU8 189 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 CT45A7P0DMV0 189 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 PTHLHP12272 177 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 ZBTB25P24278 435 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 THBS3P49746 956 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 OXA1LQ15070 435 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 DEFB136Q30KP8 78 aa13.67□□□□□ -0.22
MRPL28-207ENST00000461550 CXorf66Q5JRM2 361 aaPredicted RBP13.67□□□□□ -0.22
MRPL28-207ENST00000461550 ZNF695Q8IW36 515 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms