RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 TMED3Q9Y3Q3 217 aa12.97□□□□□ -0.33
PCYT1A-212ENST00000460677 MALRD1Q5VYJ5 2156 aa12.97□□□□□ -0.33
PCYT1A-212ENST00000460677 YLPM1P49750 1951 aaKnown RBP12.97□□□□□ -0.33
PCYT1A-212ENST00000460677 MPTX1A8MV57 137 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 KIAA1324LA8MWY0 1029 aaPredicted RBP12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 VWC2LB2RUY7 222 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 DUTP33316 252 aaKnown RBP12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 DSCR9P59020 149 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 RPL30P62888 115 aaKnown RBP12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 RPL39P5Q59GN2 51 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 LINC00311Q8N616 119 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 SLC35G3Q8N808 338 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 ZNF596Q8TC21 504 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 TCTEX1D2Q8WW35 142 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 MARVELD3Q96A59 401 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 TMEM133Q9H2Q1 129 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 FAM212BQ9NTI7 297 aaPredicted RBP12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 DOCK11Q5JSL3 2073 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 AKAP6Q13023 2319 aa12.96□□□□□ -0.33
PCYT1A-212ENST00000460677 SAA2-SAA4A0A096LPE2 208 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 A8MXK9 166 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 J3QR06 171 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 M0R1X1 148 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 SAA2P0DJI9 122 aaPredicted RBP12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 RPA2P15927 270 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 ZFP36P26651 326 aaKnown RBP12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 KRTAP10-9P60411 292 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 FGL1Q08830 312 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 ZNF585BQ52M93 769 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 C1orf229Q6ZS94 237 aaPredicted RBP12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 ABHD12Q8N2K0 398 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 OR11H4Q8NGC9 324 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 OR9G1Q8NH87 305 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 ZNF251Q9BRH9 671 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 COMMD9Q9P000 198 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 ONECUT1Q9UBC0 465 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 DCHS2Q6V1P9 2916 aa12.95□□□□□ -0.34
PCYT1A-212ENST00000460677 LINC00473A8K010 186 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 M0R1W7 72 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 ENSAO43768 121 aaKnown RBP12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 IAH1Q2TAA2 248 aaPredicted RBP12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 S1PR3Q99500 378 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 IGKV1-39P01597 117 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 IGKV1D-39P04432 117 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 VDAC1P21796 283 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 LPAR6P43657 344 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 BRWD1-AS2P59051 145 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 IL15RAQ13261 267 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 NCR3LG1Q68D85 454 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 SPAG16Q8N0X2 631 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 KIR3DL3Q8N743 410 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 Q8N7P7 452 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 DRAXINQ8NBI3 349 aaPredicted RBP12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 CD300LFQ8TDQ1 290 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 PPP1R1CQ8WVI7 109 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 TNFRSF14Q92956 283 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 ADTRPQ96IZ2 230 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 GSKIPQ9P0R6 139 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 ZNRD1Q9P1U0 126 aa12.94□□□□□ -0.34
PCYT1A-212ENST00000460677 USP9YO00507 2555 aaPredicted RBP12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 IGHV4-30-2A0A087WSY4 118 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 TRAV14DV4A0A0A6YYC5 116 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 IGHV2-26A0A0B4J1V2 119 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 TOR1AO14656 332 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 RAMP3O60896 148 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 FOXH1O75593 365 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 PSMB6P28072 239 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 THBS3P49746 956 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 PRRX1P54821 245 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 LINC00205P59089 165 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 ARF6P62330 175 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 LCN2P80188 198 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 PAX2Q02962 417 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 NMSQ5H8A3 153 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 OR2B11Q5JQS5 317 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 C1orf122Q6ZSJ8 110 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 ZNF833PQ6ZTB9 187 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 OR10X1Q8NGY0 326 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 TMEM186Q96B77 213 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 SPIN2AQ99865 258 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 SPIN2BQ9BPZ2 258 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 CLEC7AQ9BXN2 247 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 BEX4Q9NWD9 120 aaPredicted RBP12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 PRELID3BQ9Y3B1 194 aa12.93□□□□□ -0.34
PCYT1A-212ENST00000460677 UTP20O75691 2785 aaKnown RBP12.92□□□□□ -0.34
PCYT1A-212ENST00000460677 IGHV4-61A0A0C4DH41 118 aa12.92□□□□□ -0.34
PCYT1A-212ENST00000460677 IGHV2-70DA0A0C4DH43 119 aa12.92□□□□□ -0.34
PCYT1A-212ENST00000460677 RBFOX2O43251 390 aaKnown RBP eCLIP12.92□□□□□ -0.348e-7■■■□□ 16.6
PCYT1A-212ENST00000460677 KIR2DS2P43631 304 aa12.92□□□□□ -0.34
PCYT1A-212ENST00000460677 LRRC37A5PQ49AS3 106 aa12.92□□□□□ -0.34
PCYT1A-212ENST00000460677 FAM71F2Q6NXP2 309 aa12.92□□□□□ -0.34
PCYT1A-212ENST00000460677 DDB2Q92466 427 aa12.92□□□□□ -0.34
PCYT1A-212ENST00000460677 LSM10Q969L4 123 aaKnown RBP12.92□□□□□ -0.34
PCYT1A-212ENST00000460677 POLR3KQ9Y2Y1 108 aaPredicted RBP12.92□□□□□ -0.34
PCYT1A-212ENST00000460677 FCGR3BO75015 233 aa12.91□□□□□ -0.34
PCYT1A-212ENST00000460677 ATG12O94817 140 aa12.91□□□□□ -0.34
PCYT1A-212ENST00000460677 MPC2O95563 127 aa12.91□□□□□ -0.34
PCYT1A-212ENST00000460677 SLC25A4P12235 298 aa12.91□□□□□ -0.34
PCYT1A-212ENST00000460677 PRTN3P24158 256 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms