RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 FOXRED2Q8IWF2 684 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 ZNF645Q8N7E2 425 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 TCTEX1D1Q8N7M0 179 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 HSD17B10Q99714 261 aaKnown RBP8.57□□□□□ -1.04
UBR4-208ENST00000459947 MDFIQ99750 246 aa8.57□□□□□ -1.04
UBR4-208ENST00000459947 MRPL20Q9BYC9 149 aaKnown RBP8.57□□□□□ -1.04
UBR4-208ENST00000459947 IGKV1-6A0A0C4DH72 117 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 LGALS7P47929 136 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 ZNF134P52741 427 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 CATR1Q13166 79 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 HERPUD1Q15011 391 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 Q6ZPA2 131 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 ODF3L1Q8IXM7 274 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 SGMS2Q8NHU3 365 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 FCAMRQ8WWV6 532 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 DGCR14Q96DF8 476 aaKnown RBP8.56□□□□□ -1.04
UBR4-208ENST00000459947 IGHV3-7P01780 117 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 ECI1P42126 302 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 OR5AN1Q8NGI8 311 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 DEDD2Q8WXF8 326 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 AGMATQ9BSE5 352 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 OR2D2Q9H210 308 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 ZNF230Q9UIE0 474 aaPredicted RBP8.56□□□□□ -1.04
UBR4-208ENST00000459947 ANK3Q12955 4377 aaKnown RBP8.56□□□□□ -1.04
UBR4-208ENST00000459947 GABARAPH6UMI1 98 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 OR5H8P0DN80 308 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 IGSF11Q5DX21 431 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 LINC01006Q8NI28 216 aa8.56□□□□□ -1.04
UBR4-208ENST00000459947 M0R1X1 148 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 CHST1O43916 411 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 SLC35B1P78383 322 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 MEF2DQ14814 521 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 CHPT1Q8WUD6 406 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 DIRAS2Q96HU8 199 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 RBM38Q9H0Z9 239 aaKnown RBP8.55□□□□□ -1.04
UBR4-208ENST00000459947 ZNF702PQ9H963 129 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 SLC35D1Q9NTN3 355 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 OR8U9P0C7N5 309 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 DYRK1AQ13627 763 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 NPBQ8NG41 125 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 OR8U1Q8NH10 309 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 NBR2O15453 112 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 CSF1P09603 554 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 REG1BP48304 166 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 TAS2R19P59542 299 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 VAX1Q5SQQ9 334 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 WFDC12Q8WWY7 111 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 C6orf62Q9GZU0 229 aaPredicted RBP8.55□□□□□ -1.04
UBR4-208ENST00000459947 EHFQ9NZC4 300 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 RBMX2Q9Y388 322 aaKnown RBP8.55□□□□□ -1.04
UBR4-208ENST00000459947 CSMD1Q96PZ7 3565 aa8.55□□□□□ -1.04
UBR4-208ENST00000459947 H0YJW9 148 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 IFNA6P05013 189 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 PROK1P58294 105 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 ARRDC1Q8N5I2 433 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 C5orf56Q8N8D9 126 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 TMEM229BQ8NBD8 167 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 CD300LFQ8TDQ1 290 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 MAFIPQ8WZ33 124 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 H7C2Y5 167 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 OPN1MWP04001 364 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 OPN1MW2P0DN77 364 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 OPN1MW3P0DN78 364 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 MDKP21741 143 aaPredicted RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 AP3S2P59780 193 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 CCBE1Q6UXH8 406 aaPredicted RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 TMEM219Q86XT9 240 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 OR6F1Q8NGZ6 308 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 SLIRPQ9GZT3 109 aaKnown RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 MTFP1Q9UDX5 166 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 AP4M1O00189 453 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 GSTZ1O43708 216 aaPredicted RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 PPYP01298 95 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 FCGR2CP31995 323 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 VMA21Q3ZAQ7 101 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 LINC00299Q6ZSB3 139 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 SLC35E3Q7Z769 313 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 SNX29P2Q8IUI4 249 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 POC5Q8NA72 575 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 OSR1Q8TAX0 266 aaPredicted RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 FLYWCH2Q96CP2 140 aaKnown RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 ABHD14BQ96IU4 210 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 FAM212BQ9NTI7 297 aaPredicted RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 ZANQ9Y493 2812 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 ZNF736B4DX44 427 aaPredicted RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 M0QZ24 198 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 NDUFA3O95167 84 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 HLA-DRB1P01911 266 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 CT45A6P0DMU7 189 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 CT45A5P0DMU8 189 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 CT45A7P0DMV0 189 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 FAUP35544 74 aaKnown RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 UCP3P55916 312 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 MMDQ15546 238 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 RNASE10Q5GAN6 216 aaKnown RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 ZNF660Q6AZW8 331 aaPredicted RBP8.54□□□□□ -1.04
UBR4-208ENST00000459947 DHRS11Q6UWP2 260 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 FAM131AQ6UXB0 335 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 CMTM1Q8IZ96 169 aa8.54□□□□□ -1.04
UBR4-208ENST00000459947 SMIM4Q8WVI0 70 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms