RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 STUB1Q9UNE7 303 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 WASHC3Q9Y3C0 194 aa9.44□□□□□ -0.9
GPNMB-204ENST00000459927 PNMA8CA0A1B0GUJ8 204 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 TRGV3P03979 118 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 TFAP2AP05549 437 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 UBBP0CG47 229 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 LINC00205P59089 165 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 TAS2R43P59537 309 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 RPS27AP62979 156 aaKnown RBP9.43□□□□□ -0.9
GPNMB-204ENST00000459927 HAGHQ16775 308 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 C1orf100Q5SVJ3 147 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 SGPP2Q8IWX5 399 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 NKAIN3Q8N8D7 197 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 OR5T1Q8NG75 326 aa9.43□□□□□ -0.9
GPNMB-204ENST00000459927 PARP12Q9H0J9 701 aaKnown RBP9.43□□□□□ -0.9
GPNMB-204ENST00000459927 EFCAB10A6NFE3 127 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 CA2P00918 260 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 ZP3P21754 424 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 ZBTB25P24278 435 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 RPS16P62249 146 aaKnown RBP9.42□□□□□ -0.9
GPNMB-204ENST00000459927 FXYD3Q14802 87 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 ACSM3Q53FZ2 586 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 TTC23Q5W5X9 447 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 ADAMTSL5Q6ZMM2 481 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 SVOPQ8N4V2 548 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 NANOGP1Q8N7R0 232 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 DRAXINQ8NBI3 349 aaPredicted RBP9.42□□□□□ -0.9
GPNMB-204ENST00000459927 KCNG3Q8TAE7 436 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 PTX4Q96A99 478 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 ISOC1Q96CN7 298 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 TM2D1Q9BX74 207 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 RIMS4Q9H426 269 aaPredicted RBP9.42□□□□□ -0.9
GPNMB-204ENST00000459927 ZNF355PQ9NSJ1 428 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 PLEKHJ1Q9NW61 149 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 HYDINQ4G0P3 5121 aa9.42□□□□□ -0.9
GPNMB-204ENST00000459927 TRBV6-6A0A0A6YYG2 114 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 A0A0G2JLM5 398 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 C13orf42A0A1B0GVH6 325 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 ANKRD34BA5PLL1 514 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 H0Y980 276 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 SLC22A1O15245 554 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 IGKV1-16P04430 117 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 ARSBP15848 533 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 CPEP16870 476 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 QRFPP83859 136 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 INSL4Q14641 139 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 GLT8D1Q68CQ7 371 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 LAIR2Q6ISS4 152 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 LRRTM1Q86UE6 522 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 ZNF383Q8NA42 475 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 SETD6Q8TBK2 473 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 TSNAXQ99598 290 aaKnown RBP9.41□□□□□ -0.9
GPNMB-204ENST00000459927 SPATA25Q9BR10 227 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 NICN1Q9BSH3 213 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 RSRP1Q9BUV0 290 aa9.41□□□□□ -0.9
GPNMB-204ENST00000459927 CHMP1AQ9HD42 196 aaPredicted RBP9.41□□□□□ -0.9
GPNMB-204ENST00000459927 A0A0A6YYD4 124 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 TMEM14DPA8MWL7 114 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 H3BUA1 57 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 BRI3O95415 125 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 IFNA6P05013 189 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 CRYGBP07316 175 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 SCTP09683 121 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 SRMP19623 302 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 MAPK3P27361 379 aaPredicted RBP9.4□□□□□ -0.9
GPNMB-204ENST00000459927 MECP2P51608 486 aaKnown RBP9.4□□□□□ -0.9
GPNMB-204ENST00000459927 WNT4P56705 351 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 UNC119Q13432 240 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 MOGAT2Q3SYC2 334 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 FAM89BQ8N5H3 189 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 POC5Q8NA72 575 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 OR9G4Q8NGQ1 327 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 CYGBQ8WWM9 190 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 EDARADDQ8WWZ3 215 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 THRSPQ92748 146 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 THAP7Q9BT49 309 aaPredicted RBP9.4□□□□□ -0.9
GPNMB-204ENST00000459927 TMEM59Q9BXS4 323 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 PLCXD1Q9NUJ7 323 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 OR1A1Q9P1Q5 309 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 PSORS1C1Q9UIG5 152 aa9.4□□□□□ -0.9
GPNMB-204ENST00000459927 SOCS1O15524 211 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 SPDEFO95238 335 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 CNIH1O95406 144 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 CSN3P07498 182 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 LGALS7P47929 136 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 TMEM50BP56557 158 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 SSBP2P81877 361 aaPredicted RBP9.39□□□□□ -0.91
GPNMB-204ENST00000459927 PJVKQ0ZLH3 352 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 TATDN3Q17R31 274 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 DHRSXQ8N5I4 330 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 MS4A15Q8N5U1 240 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 SETD9Q8NE22 299 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 PHYHIPQ92561 330 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 TMEM68Q96MH6 324 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 TUBA4BQ9H853 241 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 Q9N2K0 584 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 SIGLEC8Q9NYZ4 499 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 PEF1Q9UBV8 284 aaKnown RBP9.39□□□□□ -0.91
GPNMB-204ENST00000459927 AK3Q9UIJ7 227 aa9.39□□□□□ -0.91
GPNMB-204ENST00000459927 ZNF221Q9UK13 617 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms