RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MRPL52Q86TS9 123 aaKnown RBP8.59□□□□□ -1.03
USP39-210ENST00000459775 UBALD1Q8TB05 177 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 PLPPR1Q8TBJ4 325 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 MRPS24Q96EL2 167 aaKnown RBP8.59□□□□□ -1.03
USP39-210ENST00000459775 NEDD4LQ96PU5 975 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 FOXC2Q99958 501 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 DCTN5Q9BTE1 182 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 HRASLSQ9HDD0 168 aa8.59□□□□□ -1.03
USP39-210ENST00000459775 NKX6-3A6NJ46 265 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 PDCD6O75340 191 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 PRSS3P35030 304 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 ARFRP1Q13795 201 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 SMIM21Q3B7S5 101 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 NHLRC3Q5JS37 347 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 TMEM144Q7Z5S9 345 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 TRAPPC6BQ86SZ2 158 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 NOXA1Q86UR1 476 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 Q8IYB0 196 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 ZNF525Q8N782 197 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 CCDC107Q8WV48 283 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 RBPMSQ93062 196 aaKnown RBP8.58□□□□□ -1.04
USP39-210ENST00000459775 ST6GALNAC5Q9BVH7 336 aa8.58□□□□□ -1.04
USP39-210ENST00000459775 DPCDQ9BVM2 203 aaPredicted RBP8.58□□□□□ -1.04
USP39-210ENST00000459775 POLR3KQ9Y2Y1 108 aaPredicted RBP8.58□□□□□ -1.04
USP39-210ENST00000459775 PPIAL4EA0A075B759 164 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 PPIAL4DF5H284 164 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 RNASEK-C17orf49H0YIS7 233 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 H7C417 338 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 SH2D1BO14796 132 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 UPK1BO75841 260 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 PPIAL4FP0DN26 164 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 RRASP10301 218 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 GZMHP20718 246 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 PDLIM4P50479 330 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 AESQ08117 197 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 COMMD7Q86VX2 200 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 SMIM4Q8WVI0 70 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 FCAMRQ8WWV6 532 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 RHOFQ9HBH0 211 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 RCC2Q9P258 522 aaKnown RBP8.57□□□□□ -1.04
USP39-210ENST00000459775 ZNF222Q9UK12 451 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 PPIAL4AQ9Y536 164 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 LRRC30A6NM36 301 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 KNG1P01042 644 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 GDNFP39905 211 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 RAB31Q13636 194 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 EDDM3AQ14507 147 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 Q5BKY6 102 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 GLCCI1Q86VQ1 547 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 LYSMD2Q8IV50 215 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 GDPD1Q8N9F7 314 aa8.57□□□□□ -1.04
USP39-210ENST00000459775 TMEM213A2RRL7 107 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 MCRIP1C9JLW8 97 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 GOSR2O14653 212 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 TMPRSS2O15393 492 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 PLA2G10O15496 165 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 PPIHO43447 177 aaKnown RBP8.56□□□□□ -1.04
USP39-210ENST00000459775 ZNF737O75373 536 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 F12P00748 615 aaPredicted RBP8.56□□□□□ -1.04
USP39-210ENST00000459775 RCC1P18754 421 aaPredicted RBP8.56□□□□□ -1.04
USP39-210ENST00000459775 OR3A1P47881 315 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 IL13RA2Q14627 380 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 MPV17LQ2QL34 196 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 SPIN3Q5JUX0 258 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 ZNF57Q68EA5 555 aaPredicted RBP8.56□□□□□ -1.04
USP39-210ENST00000459775 STUMQ69YW2 141 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 FAM53AQ6NSI3 398 aaPredicted RBP8.56□□□□□ -1.04
USP39-210ENST00000459775 PLET1Q6UQ28 207 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 GAFA1Q96PS6 74 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 CMSS1Q9BQ75 279 aaKnown RBP8.56□□□□□ -1.04
USP39-210ENST00000459775 TMPRSS5Q9H3S3 457 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 SCP2D1Q9UJQ7 156 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 MED13LQ71F56 2210 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 KIAA1324LA8MWY0 1029 aaPredicted RBP8.56□□□□□ -1.04
USP39-210ENST00000459775 TSTD3H0UI37 97 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 GABARAPH6UMI1 98 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 M0QYG6 137 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 CSN2P05814 226 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 GLIPR1P48060 266 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 EFNA4P52798 201 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 BTG1P62324 171 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 VAMP3Q15836 100 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 ATP6V1FQ16864 119 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 CLLU1Q5K131 121 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 RBMS3Q6XE24 437 aaKnown RBP8.56□□□□□ -1.04
USP39-210ENST00000459775 C1orf87Q8N0U7 546 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 COQ2Q96H96 371 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 MED9Q9NWA0 146 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 RASL12Q9NYN1 266 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 CTSZQ9UBR2 303 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 SLC23A1Q9UHI7 598 aa8.56□□□□□ -1.04
USP39-210ENST00000459775 DISC1C4P0D8 188 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 CTDSPLO15194 276 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 GSTZ1O43708 216 aaPredicted RBP8.55□□□□□ -1.04
USP39-210ENST00000459775 C1QBP02746 253 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 CD3DP04234 171 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 LPLP06858 475 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 ANXA3P12429 323 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 MFAP4P55083 255 aa8.55□□□□□ -1.04
USP39-210ENST00000459775 RAB2AP61019 212 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms