RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 NQO2P16083 231 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 CCL3L1P16619 93 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 COL8A1P27658 744 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 PSMB6P28072 239 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 DVL1P1P54792 670 aaPredicted RBP4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 LOXL3P58215 753 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 RPS16P62249 146 aaKnown RBP4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 RPL23AP62750 156 aaKnown RBP4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 EIF5AP63241 154 aaKnown RBP4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 SCGB2A2Q13296 93 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 ZNF273Q14593 569 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 PLGLAQ15195 96 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 FCN2Q15485 313 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 C17orf58Q2M2W7 97 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 SP6Q3SY56 376 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 VMA21Q3ZAQ7 101 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 GPR157Q5UAW9 335 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 PRSS57Q6UWY2 283 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 SLC25A48Q6ZT89 311 aaKnown RBP4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 MOB3BQ86TA1 216 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 FOXRED2Q8IWF2 684 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 TCTE3Q8IZS6 198 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR4C13Q8NGP0 309 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 CLDND2Q8NHS1 167 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 LHX4Q969G2 390 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 FLYWCH2Q96CP2 140 aaKnown RBP4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 SEC22AQ96IW7 307 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 PCGF1Q9BSM1 259 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 SLC25A31Q9H0C2 315 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 HIPK2Q9H2X6 1198 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 LINC00574Q9H8X3 128 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 PLEKHA2Q9HB19 425 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 RANGRFQ9HD47 186 aaPredicted RBP4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 SLC35D1Q9NTN3 355 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 SDHAF2Q9NX18 166 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 KIAA1456Q9P272 454 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 CTSZQ9UBR2 303 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 ITGB1BP2Q9UKP3 347 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 NUP50Q9UKX7 468 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 ARID1AO14497 2285 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 PRRC2CQ9Y520 2896 aaKnown RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 FXYD6-FXYD2A0A087WZ82 144 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 SAA2-SAA4A0A096LPE2 208 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 IGHV2-26A0A0B4J1V2 119 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 IGKV1D-13A0A0B4J2D9 117 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 IGHV2-70DA0A0C4DH43 119 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 A0A0D9SG52 128 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 CLEC18AA5D8T8 446 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 OOSP1A8MZH6 123 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 CYB5BO43169 146 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 RBFOX2O43251 390 aaKnown RBP eCLIP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 TSPAN9O75954 239 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 KRASP01116 189 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 IFNA17P01571 189 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 MSMBP08118 114 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 SAA2P0DJI9 122 aaPredicted RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 CGB3P0DN86 165 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 CGB7P0DN87 165 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 IGKV1-13P0DP09 117 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 SLC25A6P12236 298 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 HLA-GP17693 338 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 PRTN3P24158 256 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 COX7A1P24310 79 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 UCP1P25874 307 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 NKX2-1P43699 371 aaPredicted RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 LGALS7P47929 136 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 GZMKP49863 264 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 AP2S1P53680 142 aaPredicted RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 F2RL1P55085 397 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 BPIFB3P59826 476 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 HOXA4Q00056 320 aaPredicted RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 ZNF816Q0VGE8 651 aaPredicted RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 HES1Q14469 280 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 TMEM187Q14656 261 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 LRRC37A5PQ49AS3 106 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 CT45A1Q5HYN5 189 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 MINOS1Q5TGZ0 78 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 GGNBP1Q5YKI7 109 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 ZNF841Q6ZN19 808 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 ZNF546Q86UE3 836 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 NOXA1Q86UR1 476 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 PDPNQ86YL7 162 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 PNKDQ8N490 385 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 LINC00311Q8N616 119 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 SLC35G3Q8N808 338 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 LRTM2Q8N967 370 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 LINC01356Q8N9X3 169 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 CLEC18CQ8NCF0 446 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 BEND2Q8NDZ0 799 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR5M8Q8NGP6 311 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 CT45A3Q8NHU0 189 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 OSR1Q8TAX0 266 aaPredicted RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 GLYATL2Q8WU03 294 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 LEAP2Q969E1 77 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 LSM10Q969L4 123 aaKnown RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 R3HDM4Q96D70 268 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 MBD6Q96DN6 1003 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 TMEM56Q96MV1 263 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 CIB3Q96Q77 187 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms