RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 LINC00322Q6ZN03 302 aaPredicted RBP4.31□□□□□ -1.72
VPS8-214ENST00000458721 PPP1R27Q86WC6 154 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 PRR18Q8N4B5 295 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 NKAIN3Q8N8D7 197 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 OR10V1Q8NGI7 309 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 CCDC107Q8WV48 283 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 GALMQ96C23 342 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 LGALS12Q96DT0 336 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 SMIM19Q96E16 107 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 RDH12Q96NR8 316 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 TSNAXQ99598 290 aaKnown RBP4.31□□□□□ -1.72
VPS8-214ENST00000458721 ZNF184Q99676 751 aaPredicted RBP4.31□□□□□ -1.72
VPS8-214ENST00000458721 HIPK2Q9H2X6 1198 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 IFI27L2Q9H2X8 130 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 TUBA4BQ9H853 241 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 TAF9BQ9HBM6 251 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 TAS2R4Q9NYW5 299 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 CNOT2Q9NZN8 540 aaKnown RBP4.31□□□□□ -1.72
VPS8-214ENST00000458721 ABRACLQ9P1F3 81 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 PEMTQ9UBM1 199 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 GHRLQ9UBU3 117 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 STEAP1Q9UHE8 339 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 MGAT4AQ9UM21 535 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 OAZ3Q9UMX2 235 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 WASHC3Q9Y3C0 194 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 FBXO7Q9Y3I1 522 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 ALMS1Q8TCU4 4167 aa4.31□□□□□ -1.72
VPS8-214ENST00000458721 ERICH4A6NGS2 130 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 PDCD6O75340 191 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 TPPPO94811 219 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 MAS1P04201 325 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 IGFBP3P17936 291 aaPredicted RBP4.3□□□□□ -1.72
VPS8-214ENST00000458721 NAT1P18440 290 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 RCC1P18754 421 aaPredicted RBP4.3□□□□□ -1.72
VPS8-214ENST00000458721 MAP2K4P45985 399 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 RASSF2P50749 326 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 SUMO1P63165 101 aaKnown RBP4.3□□□□□ -1.72
VPS8-214ENST00000458721 HMGN3Q15651 99 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 Q499Y3 187 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 YIF1BQ5BJH7 314 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 C6orf141Q5SZD1 244 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 GLT8D1Q68CQ7 371 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 FAM53AQ6NSI3 398 aaPredicted RBP4.3□□□□□ -1.72
VPS8-214ENST00000458721 FAM131AQ6UXB0 335 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 OR5AN1Q8NGI8 311 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 OR4K15Q8NH41 348 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 OR1L1Q8NH94 360 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 ABHD5Q8WTS1 349 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 DDB2Q92466 427 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 RGP1Q92546 391 aaPredicted RBP4.3□□□□□ -1.72
VPS8-214ENST00000458721 USMG5Q96IX5 58 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 OR14A2Q96R54 314 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 UQCC2Q9BRT2 126 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 FBXL15Q9H469 300 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 MRPS18AQ9NVS2 196 aaKnown RBP4.3□□□□□ -1.72
VPS8-214ENST00000458721 SLC2A8Q9NY64 477 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 SLC23A1Q9UHI7 598 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 RPL36Q9Y3U8 105 aaKnown RBP4.3□□□□□ -1.72
VPS8-214ENST00000458721 PEX16Q9Y5Y5 336 aa4.3□□□□□ -1.72
VPS8-214ENST00000458721 A0A0B4J203 849 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 IRGMA1A4Y4 181 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 FAM223BA6NKX1 122 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 H0YJW9 148 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 NDUFB8O95169 186 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 CNIH1O95406 144 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 IGHV3-11P01762 117 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 APOA2P02652 100 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 UBBP0CG47 229 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 EGR2P11161 476 aaPredicted RBP4.29□□□□□ -1.72
VPS8-214ENST00000458721 MGMTP16455 207 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 GABRB1P18505 474 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 MAPK3P27361 379 aaPredicted RBP4.29□□□□□ -1.72
VPS8-214ENST00000458721 DCKP27707 260 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 PPP1CCP36873 323 aaKnown RBP4.29□□□□□ -1.72
VPS8-214ENST00000458721 POLR2IP36954 125 aaKnown RBP4.29□□□□□ -1.72
VPS8-214ENST00000458721 LGALS7P47929 136 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 SOX2P48431 317 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 ALDH3A2P51648 485 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 CD81P60033 236 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 ADARB1P78563 741 aaKnown RBP4.29□□□□□ -1.72
VPS8-214ENST00000458721 GNMTQ14749 295 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 RPEL1Q2QD12 228 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 DMKNQ6E0U4 476 aaPredicted RBP4.29□□□□□ -1.72
VPS8-214ENST00000458721 AWAT2Q6E213 333 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 ZNF343Q6P1L6 599 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 IL34Q6ZMJ4 242 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 TMPRSS11AQ6ZMR5 421 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 LHFPL3Q86UP9 236 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 PDPNQ86YL7 162 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 FAM223AQ8IWN6 122 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.29□□□□□ -1.72
VPS8-214ENST00000458721 LFNGQ8NES3 379 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 UBALD1Q8TB05 177 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 MRPL30Q8TCC3 161 aaKnown RBP4.29□□□□□ -1.72
VPS8-214ENST00000458721 SLC7A6OSQ96CW6 309 aaPredicted RBP4.29□□□□□ -1.72
VPS8-214ENST00000458721 AGMATQ9BSE5 352 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 TMED9Q9BVK6 235 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
VPS8-214ENST00000458721 TINAGL1Q9GZM7 467 aaPredicted RBP4.29□□□□□ -1.72
VPS8-214ENST00000458721 RIMS4Q9H426 269 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms