RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 NDUFA6P56556 154 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 RPP25LQ8N5L8 163 aaKnown RBP17.3■□□□□ 0.36
CRAT-207ENST00000458362 TPRX1Q8N7U7 411 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 ZNF610Q8N9Z0 462 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 ZBTB34Q8NCN2 500 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 UFSP2Q9NUQ7 469 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 CACNA1DQ01668 2161 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 CYB5BO43169 146 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 PTBP3O95758 552 aaKnown RBP17.3■□□□□ 0.36
CRAT-207ENST00000458362 LINC00205P59089 165 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 ACSM6Q6P461 480 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 VWA1Q6PCB0 445 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 VAX2Q9UIW0 290 aa17.3■□□□□ 0.36
CRAT-207ENST00000458362 DOCK11Q5JSL3 2073 aa17.29■□□□□ 0.36
CRAT-207ENST00000458362 LRRC30A6NM36 301 aa17.29■□□□□ 0.36
CRAT-207ENST00000458362 B4DEV8 164 aa17.29■□□□□ 0.36
CRAT-207ENST00000458362 IGHG3P01860 377 aa17.29■□□□□ 0.36
CRAT-207ENST00000458362 RPS16P62249 146 aaKnown RBP17.29■□□□□ 0.36
CRAT-207ENST00000458362 WDR82Q6UXN9 313 aa17.29■□□□□ 0.36
CRAT-207ENST00000458362 MRGPRGQ86SM5 289 aa17.29■□□□□ 0.36
CRAT-207ENST00000458362 CXXC4Q9H2H0 198 aa17.29■□□□□ 0.36
CRAT-207ENST00000458362 SDF2L1Q9HCN8 221 aa17.29■□□□□ 0.36
CRAT-207ENST00000458362 DOK5Q9P104 306 aa17.29■□□□□ 0.36
CRAT-207ENST00000458362 PRRC2CQ9Y520 2896 aaKnown RBP17.29■□□□□ 0.36
CRAT-207ENST00000458362 KIR2DL2P43627 348 aaPredicted RBP17.28■□□□□ 0.36
CRAT-207ENST00000458362 GABRA2P47869 451 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 MSMO1Q15800 293 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 ZDHHC16Q969W1 377 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 PINX1Q96BK5 328 aaKnown RBP17.28■□□□□ 0.36
CRAT-207ENST00000458362 SSX3Q99909 188 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 TMPRSS5Q9H3S3 457 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 MSL2Q9HCI7 577 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 IGHV3-43A0A0B4J1X8 118 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.28■□□□□ 0.36
CRAT-207ENST00000458362 NKX2-8O15522 239 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 IGKV3-15P01624 115 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 IGHV3-43DP0DP04 118 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 SSTR5P35346 364 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 SPNS3Q6ZMD2 512 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 C9orf106Q8NAJ2 232 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 TOLLIPQ9H0E2 274 aa17.28■□□□□ 0.36
CRAT-207ENST00000458362 OR5H1A6NKK0 313 aa17.27■□□□□ 0.36
CRAT-207ENST00000458362 PMS2P5A8MQ11 134 aa17.27■□□□□ 0.36
CRAT-207ENST00000458362 HMGB3O15347 200 aaKnown RBP17.27■□□□□ 0.36
CRAT-207ENST00000458362 ZG16O60844 167 aa17.27■□□□□ 0.36
CRAT-207ENST00000458362 CCL11P51671 97 aa17.27■□□□□ 0.36
CRAT-207ENST00000458362 TLE1Q04724 770 aa17.27■□□□□ 0.36
CRAT-207ENST00000458362 OR13A1Q8NGR1 328 aa17.27■□□□□ 0.36
CRAT-207ENST00000458362 LHX4Q969G2 390 aa17.27■□□□□ 0.36
CRAT-207ENST00000458362 P2RX4Q99571 388 aa17.27■□□□□ 0.36
CRAT-207ENST00000458362 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.27■□□□□ 0.36
CRAT-207ENST00000458362 TIMM9Q9Y5J7 89 aa17.27■□□□□ 0.36
CRAT-207ENST00000458362 PTPRBP23467 1997 aa17.27■□□□□ 0.36
CRAT-207ENST00000458362 TIMM8AO60220 97 aaPredicted RBP17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST1H2BKO60814 126 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 ZNF737O75373 536 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 TRGC2P03986 189 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST1H2BJP06899 126 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST1H2BOP23527 126 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST1H2BBP33778 126 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST1H2BDP58876 126 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST1H2BCP62807 126 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 COL10A1Q03692 680 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST2H2BEQ16778 126 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.27■□□□□ 0.35
CRAT-207ENST00000458362 CENPVQ7Z7K6 275 aaPredicted RBP17.27■□□□□ 0.35
CRAT-207ENST00000458362 RFESDQ8TAC1 157 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 PRR7Q8TB68 274 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST1H2BHQ93079 126 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST1H2BNQ99877 126 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 HIST1H2BMQ99879 126 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 DCTN5Q9BTE1 182 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 SLC39A9Q9NUM3 307 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 MIOXQ9UGB7 285 aa17.27■□□□□ 0.35
CRAT-207ENST00000458362 LINC00473A8K010 186 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 DEFB108AA8MXU0 73 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 CYB5R3P00387 301 aaPredicted RBP17.26■□□□□ 0.35
CRAT-207ENST00000458362 CECR9P0C854 216 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 COX5AP20674 150 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 FABP6P51161 128 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 CD81P60033 236 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 PNRC1Q12796 327 aaPredicted RBP17.26■□□□□ 0.35
CRAT-207ENST00000458362 CATR1Q13166 79 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 SPINK9Q5DT21 86 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 WDR25Q64LD2 544 aaPredicted RBP17.26■□□□□ 0.35
CRAT-207ENST00000458362 NINJ1Q92982 152 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 RND2P52198 227 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 TFF3Q07654 80 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 FOXF2Q12947 444 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 FDCSPQ8NFU4 85 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 TMEM147Q9BVK8 224 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 SLC25A22Q9H936 323 aa17.26■□□□□ 0.35
CRAT-207ENST00000458362 CACNA1GO43497 2377 aa17.25■□□□□ 0.35
CRAT-207ENST00000458362 CDX1P47902 265 aaPredicted RBP17.25■□□□□ 0.35
CRAT-207ENST00000458362 DTD1Q8TEA8 209 aa17.25■□□□□ 0.35
CRAT-207ENST00000458362 OR51M1Q9H341 326 aa17.25■□□□□ 0.35
CRAT-207ENST00000458362 ST8SIA5O15466 376 aa17.24■□□□□ 0.35
CRAT-207ENST00000458362 CLDN14O95500 239 aa17.24■□□□□ 0.35
CRAT-207ENST00000458362 IFNA1P01562 189 aa17.24■□□□□ 0.35
CRAT-207ENST00000458362 FGF7P21781 194 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms