RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 MMP23AO75900 390 aa13.52□□□□□ -0.24
CAPN13-203ENST00000458085 GAPDHP04406 335 aaKnown RBP13.52□□□□□ -0.24
CAPN13-203ENST00000458085 SLC25A6P12236 298 aa13.52□□□□□ -0.24
CAPN13-203ENST00000458085 G6PCP35575 357 aa13.52□□□□□ -0.24
CAPN13-203ENST00000458085 ERVFRD-1P60508 538 aa13.52□□□□□ -0.24
CAPN13-203ENST00000458085 RPL39P5Q59GN2 51 aa13.52□□□□□ -0.24
CAPN13-203ENST00000458085 FAM234AQ9H0X4 552 aa13.52□□□□□ -0.24
CAPN13-203ENST00000458085 NCOR1P1Q9H4R4 102 aa13.52□□□□□ -0.24
CAPN13-203ENST00000458085 LYRM2Q9NU23 88 aaPredicted RBP13.52□□□□□ -0.24
CAPN13-203ENST00000458085 KBTBD11-OT1A0A1B0GTJ5 212 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 KRASP01116 189 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 LOXP28300 417 aaPredicted RBP13.52□□□□□ -0.25
CAPN13-203ENST00000458085 EFNB3Q15768 340 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 SWI5Q1ZZU3 235 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 NCR3LG1Q68D85 454 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 LYPD2Q6UXB3 125 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 TMEM252Q8N6L7 170 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 OR1S2Q8NGQ3 325 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 EDARADDQ8WWZ3 215 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 IFI27L2Q9H2X8 130 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 CLN8Q9UBY8 286 aa13.52□□□□□ -0.25
CAPN13-203ENST00000458085 PPIAL4EA0A075B759 164 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 TRGV10A0A0A0MS01 117 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 PPIAL4DF5H284 164 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 JTBO76095 146 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 PPIAL4FP0DN26 164 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 NDUFB7P17568 137 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 GPR12P47775 334 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 VAMP2P63027 116 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 TFF3Q07654 80 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 CATR1Q13166 79 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 MSMO1Q15800 293 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 KCNJ16Q9NPI9 418 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 GFOD1Q9NXC2 390 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 PPIAL4AQ9Y536 164 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 DCHS2Q6V1P9 2916 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 HCFC1P51610 2035 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 TRAV38-1A0A0B4J264 116 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 B9A039 149 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 H3BP45 60 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 WRBO00258 174 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 CST7O76096 145 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 FGF2P09038 288 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 PVALBP20472 110 aaPredicted RBP13.51□□□□□ -0.25
CAPN13-203ENST00000458085 UBAC2Q8NBM4 344 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 MS4A5Q9H3V2 200 aa13.51□□□□□ -0.25
CAPN13-203ENST00000458085 P0C879 139 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 DUTP33316 252 aaKnown RBP13.5□□□□□ -0.25
CAPN13-203ENST00000458085 ZNF273Q14593 569 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 CLINT1Q14677 625 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 CT45A1Q5HYN5 189 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 CT45A3Q8NHU0 189 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 RNF141Q8WVD5 230 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 LINC00052Q96N35 136 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 ARV1Q9H2C2 271 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 C19orf12Q9NSK7 152 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 SLC25A10Q9UBX3 287 aaPredicted RBP13.5□□□□□ -0.25
CAPN13-203ENST00000458085 HRNRQ86YZ3 2850 aaPredicted RBP13.5□□□□□ -0.25
CAPN13-203ENST00000458085 DOCK11Q5JSL3 2073 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 NKX6-3A6NJ46 265 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 TNFRSF13BO14836 293 aaPredicted RBP13.5□□□□□ -0.25
CAPN13-203ENST00000458085 IAPPP10997 89 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 SFTPCP11686 197 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 NFYBP25208 207 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 ZNF66Q6ZN08 573 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 C1orf87Q8N0U7 546 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 RBMXL1Q96E39 390 aaKnown RBP13.5□□□□□ -0.25
CAPN13-203ENST00000458085 HSD17B10Q99714 261 aaKnown RBP13.5□□□□□ -0.25
CAPN13-203ENST00000458085 MMP24Q9Y5R2 645 aa13.5□□□□□ -0.25
CAPN13-203ENST00000458085 A8MXK9 166 aa13.49□□□□□ -0.25
CAPN13-203ENST00000458085 LYNX1G3V0Z9 82 aa13.49□□□□□ -0.25
CAPN13-203ENST00000458085 LYNX1P0DP58 116 aa13.49□□□□□ -0.25
CAPN13-203ENST00000458085 UQCRFS1P47985 274 aa13.49□□□□□ -0.25
CAPN13-203ENST00000458085 EIF5AP63241 154 aaKnown RBP13.49□□□□□ -0.25
CAPN13-203ENST00000458085 ZNF672Q499Z4 452 aaPredicted RBP13.49□□□□□ -0.25
CAPN13-203ENST00000458085 PRAMEF5Q5TYX0 476 aa13.49□□□□□ -0.25
CAPN13-203ENST00000458085 HSD17B13Q7Z5P4 300 aaPredicted RBP13.49□□□□□ -0.25
CAPN13-203ENST00000458085 MUC15Q8N387 334 aa13.49□□□□□ -0.25
CAPN13-203ENST00000458085 TMEM217Q8N7C4 229 aa13.49□□□□□ -0.25
CAPN13-203ENST00000458085 CTSZQ9UBR2 303 aa13.49□□□□□ -0.25
CAPN13-203ENST00000458085 RFNGQ9Y644 331 aa13.49□□□□□ -0.25
CAPN13-203ENST00000458085 PIGBOS1A0A0B4J2F0 54 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 ZNF705EA8MWA4 302 aaPredicted RBP13.48□□□□□ -0.25
CAPN13-203ENST00000458085 M0R1X1 148 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 CORO2AQ92828 525 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 ABHD14AQ9BUJ0 271 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 SH3BGRL3Q9H299 93 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 ZNRD1Q9P1U0 126 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 IGHV1-69-2A0A0G2JMI3 117 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 MMP9P14780 707 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 DYNLT3P51808 116 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 MIDNQ504T8 468 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 HSD17B11Q8NBQ5 300 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 IDI2-AS1Q9NZ38 188 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 LPAR3Q9UBY5 353 aa13.48□□□□□ -0.25
CAPN13-203ENST00000458085 ZNF729A6NN14 1252 aaPredicted RBP13.47□□□□□ -0.25
CAPN13-203ENST00000458085 SYNGR2O43760 224 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 ZNF439Q8NDP4 499 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 OR5C1Q8NGR4 320 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms