RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 J3QT63 122 aa16.49■□□□□ 0.23
CNEP1R1-203ENST00000458059 LAMTOR5O43504 91 aa16.49■□□□□ 0.23
CNEP1R1-203ENST00000458059 CER1O95813 267 aa16.49■□□□□ 0.23
CNEP1R1-203ENST00000458059 MEF2BQ02080 365 aaPredicted RBP16.49■□□□□ 0.23
CNEP1R1-203ENST00000458059 GCSAMLQ5JQS6 135 aa16.49■□□□□ 0.23
CNEP1R1-203ENST00000458059 DPPA3Q6W0C5 159 aa16.49■□□□□ 0.23
CNEP1R1-203ENST00000458059 MRGPRGQ86SM5 289 aa16.49■□□□□ 0.23
CNEP1R1-203ENST00000458059 IL17BQ9UHF5 180 aa16.49■□□□□ 0.23
CNEP1R1-203ENST00000458059 MPC1Q9Y5U8 109 aa16.49■□□□□ 0.23
CNEP1R1-203ENST00000458059 TRAV1-1A0A0B4J248 108 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 SMCO3A2RU48 225 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 HIST1H1BP16401 226 aaKnown RBP16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 SSX9Q7RTT3 188 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 C17orf98A8MV24 154 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 IGHEP01854 428 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 IL2RGP31785 369 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 CHRNA7P36544 502 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 TNFRSF9Q07011 255 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 SRSF7Q16629 238 aaKnown RBP eCLIP16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 FFAR4Q5NUL3 377 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 ZNF600Q6ZNG1 722 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 OR51G1Q8NGK1 321 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 MBD3L1Q8WWY6 194 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 C5orf30Q96GV9 206 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 DCTN5Q9BTE1 182 aa16.48■□□□□ 0.23
CNEP1R1-203ENST00000458059 C1QTNF9BB2RNN3 333 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 C9orf172C9J069 976 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 PAGE4O60829 102 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 HNF1AP20823 631 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 TMEM241Q24JQ0 296 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 ZNF497Q6ZNH5 498 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 OR10G4Q8NGN3 311 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 OR10G9Q8NGN4 311 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 OR10G7Q8NGN6 311 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 SDSLQ96GA7 329 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 C14orf144Q96I85 54 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 PARLQ9H300 379 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 OBP2BQ9NPH6 170 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 PGPEP1LA6NFU8 196 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 GABRA2P47869 451 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 MEOX1P50221 254 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 BSXQ3C1V8 233 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 ZNF66Q6ZN08 573 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 OR10A7Q8NGE5 316 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 LSM10Q969L4 123 aaKnown RBP16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 ODAMA1E959 279 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 H7BYZ3 331 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 PNRC1Q12796 327 aaPredicted RBP16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 RNPS1Q15287 305 aaKnown RBP16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 RTL8AQ9BWD3 113 aa16.47■□□□□ 0.23
CNEP1R1-203ENST00000458059 B4DEV8 164 aa16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 SS18L1O75177 396 aaPredicted RBP16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 IFNA1P01562 189 aa16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 GALR1P47211 349 aa16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 FAM3BP58499 235 aaPredicted RBP16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 RPL23P62829 140 aaKnown RBP16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 LRP5LA4QPB2 252 aa16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 SSTR5P35346 364 aa16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 SLC25A40Q8TBP6 338 aa16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 WASF3Q9UPY6 502 aa16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 FUT9Q9Y231 359 aa16.46■□□□□ 0.23
CNEP1R1-203ENST00000458059 GVINP1Q7Z2Y8 2422 aa16.46■□□□□ 0.22
CNEP1R1-203ENST00000458059 A0A0U1RQK1 487 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 XKRY2A2RUG3 117 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 AGFG2O95081 481 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 NRN1LQ496H8 165 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 PSMG3Q9BT73 122 aaPredicted RBP16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 GPR87Q9BY21 358 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 NAT8Q9UHE5 227 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 A0A087X0M5 115 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 A0A1B0GX30 115 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 A0A1W2PNU3 283 aaPredicted RBP16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 C12orf77C9JDV5 145 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 OPN1MWP04001 364 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 OPN1MW2P0DN77 364 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 OPN1MW3P0DN78 364 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 PSMB3P49720 205 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 RND2P52198 227 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 PPP1CBP62140 327 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 SERF2P84101 59 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 DCAF10Q5QP82 559 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 OR13D1Q8NGV5 346 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 METRNQ9UJH8 293 aa16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 SMG1Q96Q15 3661 aaKnown RBP16.45■□□□□ 0.22
CNEP1R1-203ENST00000458059 ARG2P78540 354 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 PRAMEF6Q5VXH4 476 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 RAB24Q969Q5 203 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 OPA3Q9H6K4 179 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 TNRC6BQ9UPQ9 1833 aaKnown RBP16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 TRAV38-1A0A0B4J264 116 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 A0A1B0GUS0 222 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 ST8SIA5O15466 376 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 HAND1O96004 215 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 COX5BP10606 129 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 EDDM3AQ14507 147 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 CST9LP1Q5W188 147 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 SH2D1BO14796 132 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 RAC2P15153 192 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 MPV17P39210 176 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms