RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 F2RL1P55085 397 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 ACTBP60709 375 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 SPCS2Q15005 226 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 TMEM69Q5SWH9 247 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 CLVS1Q8IUQ0 354 aaPredicted RBP11.21□□□□□ -0.61
HDAC4-205ENST00000454542 GVQW1Q8N7I0 195 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 ZNF383Q8NA42 475 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 BEST4Q8NFU0 473 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 NPBQ8NG41 125 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 AP3S1Q92572 193 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 GINS4Q9BRT9 223 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 ST6GALNAC5Q9BVH7 336 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 SDHAF2Q9NX18 166 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 COMMD3Q9UBI1 195 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 ZNF221Q9UK13 617 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 RNF150Q9ULK6 438 aa11.21□□□□□ -0.61
HDAC4-205ENST00000454542 ADARB2-AS1A8MUL3 147 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 FBXO24O75426 580 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 RBBP9O75884 186 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 HLA-DQB1P01920 261 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 OR8U9P0C7N5 309 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 NAT1P18440 290 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 MC5RP33032 325 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 MMDQ15546 238 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 GLDNQ6ZMI3 551 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-205ENST00000454542 OR8U1Q8NH10 309 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 RITA1Q96K30 269 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 CCDC59Q9P031 241 aaKnown RBP11.2□□□□□ -0.62
HDAC4-205ENST00000454542 WASHC3Q9Y3C0 194 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 OR2W1Q9Y3N9 320 aa11.2□□□□□ -0.62
HDAC4-205ENST00000454542 NCBP2LA6PVI3 153 aaKnown RBP11.19□□□□□ -0.62
HDAC4-205ENST00000454542 M0QZ24 198 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 NBR2O15453 112 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 HPGDSO60760 199 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 HLA-DRB1P01911 266 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 CD28P10747 220 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 ELK1P19419 428 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 CNTFRP26992 372 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 C2orf68Q2NKX9 166 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 ARSJQ5FYB0 599 aaPredicted RBP11.19□□□□□ -0.62
HDAC4-205ENST00000454542 SLC35E3Q7Z769 313 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 PDPNQ86YL7 162 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 DYNC2LI1Q8TCX1 351 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 GPX8Q8TED1 209 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 DDB2Q92466 427 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 RNF5Q99942 180 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 HSPB9Q9BQS6 159 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 ADAM30Q9UKF2 790 aa11.19□□□□□ -0.62
HDAC4-205ENST00000454542 VWFP04275 2813 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 IGKV1D-13A0A0B4J2D9 117 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 H3BMQ9 156 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 M0R1X1 148 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 KCNAB3O43448 404 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 SPDEFO95238 335 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 TSPAN15O95858 294 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 IGLV2-14P01704 120 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 IGKV1-13P0DP09 117 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 NFYAP23511 347 aaPredicted RBP11.18□□□□□ -0.62
HDAC4-205ENST00000454542 LINC00205P59089 165 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 CD83Q01151 205 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 CFHR3Q02985 330 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 EIF4EBP1Q13541 118 aaPredicted RBP11.18□□□□□ -0.62
HDAC4-205ENST00000454542 C5orf64Q2M2E5 130 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 C9orf152Q5JTZ5 239 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 MZT2AQ6P582 158 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 ZNF645Q8N7E2 425 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 ISOC1Q96CN7 298 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 RBM38Q9H0Z9 239 aaKnown RBP11.18□□□□□ -0.62
HDAC4-205ENST00000454542 SCPEP1Q9HB40 452 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 ZNF107Q9UII5 783 aaPredicted RBP11.18□□□□□ -0.62
HDAC4-205ENST00000454542 SCOCQ9UIL1 159 aa11.18□□□□□ -0.62
HDAC4-205ENST00000454542 PKD1L1Q8TDX9 2849 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 AP4M1O00189 453 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 PEX14O75381 377 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 TPPPO94811 219 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 APOA2P02652 100 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 IGKV1-16P04430 117 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 DUTP33316 252 aaKnown RBP11.17□□□□□ -0.62
HDAC4-205ENST00000454542 THBS3P49746 956 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 LUMP51884 338 aaPredicted RBP11.17□□□□□ -0.62
HDAC4-205ENST00000454542 ARPC4P59998 168 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 TAGLNQ01995 201 aaKnown RBP11.17□□□□□ -0.62
HDAC4-205ENST00000454542 MSMO1Q15800 293 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 HIST2H2BDQ6DRA6 164 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 C10orf99Q6UWK7 81 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 NDUFA11Q86Y39 141 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 STPG2Q8N412 459 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 C11orf44Q8N8P7 122 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 DRAXINQ8NBI3 349 aaPredicted RBP11.17□□□□□ -0.62
HDAC4-205ENST00000454542 OR5AP2Q8NGF4 316 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 CHPT1Q8WUD6 406 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 CITED2Q99967 270 aaPredicted RBP11.17□□□□□ -0.62
HDAC4-205ENST00000454542 RASL11BQ9BPW5 248 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 MIXL1Q9H2W2 232 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 NECAP2Q9NVZ3 263 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 CEPT1Q9Y6K0 416 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 MGAM2Q2M2H8 2515 aa11.17□□□□□ -0.62
HDAC4-205ENST00000454542 MEIS3P1A6NDR6 274 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 LINC01548A6NM66 108 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms