RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 MAP1AP78559 2803 aaPredicted RBP4.9□□□□□ -1.62
SDC4P-201ENST00000453285 LOC105371242A0A075B767 164 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 IGHV4-30-2A0A087WSY4 118 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 TRAV14DV4A0A0A6YYC5 116 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 J3QR06 171 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 NDUFS8O00217 210 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 B3GALNT1O75752 331 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 IGKV1-39P01597 117 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 RBP4P02753 201 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 IGKV1D-39P04432 117 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 LIPFP07098 398 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 HOXB5P09067 269 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 DUTP33316 252 aaKnown RBP4.9□□□□□ -1.63
SDC4P-201ENST00000453285 GPR12P47775 334 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 GZMKP49863 264 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 GNG10P50151 68 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 RAB7AP51149 207 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 DLX1P56177 255 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 ESCO2Q56NI9 601 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 RPL39P5Q59GN2 51 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 GGNBP1Q5YKI7 109 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 NCR3LG1Q68D85 454 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 C11orf88Q6PI97 169 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 BTNL3Q6UXE8 466 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 ZNF66Q6ZN08 573 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 LYZL2Q7Z4W2 148 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 NOXA1Q86UR1 476 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 LGI3Q8N145 548 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.9□□□□□ -1.63
SDC4P-201ENST00000453285 OR51H1Q8NH63 302 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 ASB13Q8WXK3 278 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 DDB2Q92466 427 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 FAM168AQ92567 244 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 IL22RA2Q969J5 263 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 ST6GALNAC6Q969X2 333 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 MARVELD3Q96A59 401 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 PERPQ96FX8 193 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 SEC22AQ96IW7 307 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 ABHD14AQ9BUJ0 271 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 TMEM133Q9H2Q1 129 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 POLR3KQ9Y2Y1 108 aaPredicted RBP4.9□□□□□ -1.63
SDC4P-201ENST00000453285 SESN1Q9Y6P5 492 aa4.9□□□□□ -1.63
SDC4P-201ENST00000453285 PDZD2O15018 2839 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 A0A096LNT2 108 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 SAA2-SAA4A0A096LPE2 208 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 IGHV4-61A0A0C4DH41 118 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 A0A0G2JRQ6 117 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 C13orf42A0A1B0GVH6 325 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 DUXBA0A1W2PPF3 345 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 A0A1W2PPH5 198 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 RNF212BA8MTL3 300 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 FAM157AC9JC47 383 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 M0R1W7 72 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 M0R1X1 148 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 RAB29O14966 203 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 IGLV1-47P01700 117 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 SAA2P0DJI9 122 aaPredicted RBP4.89□□□□□ -1.63
SDC4P-201ENST00000453285 DNASE1P24855 282 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 S100GP29377 79 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 LPAR6P43657 344 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 EIF2B2P49770 351 aaKnown RBP4.89□□□□□ -1.63
SDC4P-201ENST00000453285 ZNF137PP52743 207 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 NKX2-5P52952 324 aaPredicted RBP4.89□□□□□ -1.63
SDC4P-201ENST00000453285 ARF6P62330 175 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 SRPXP78539 464 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 ZFP69Q49AA0 526 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 NMSQ5H8A3 153 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 TMEM268Q5VZI3 342 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 LAMTOR1Q6IAA8 161 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 HCP5Q6MZN7 132 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 CLEC2AQ6UVW9 174 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 GSG1LQ6UXU4 331 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 C1orf122Q6ZSJ8 110 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 ZNF833PQ6ZTB9 187 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 LYG1Q8N1E2 194 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 ABHD12Q8N2K0 398 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 TCTEX1D1Q8N7M0 179 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 SLC35G3Q8N808 338 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 OR2T35Q8NGX2 323 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 OR9G1Q8NH87 305 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 TNFRSF14Q92956 283 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 RBPMSQ93062 196 aaKnown RBP4.89□□□□□ -1.63
SDC4P-201ENST00000453285 C2orf50Q96LR7 162 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 HSD17B10Q99714 261 aaKnown RBP4.89□□□□□ -1.63
SDC4P-201ENST00000453285 PIMREGQ9BSJ6 248 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 RNF126Q9BV68 326 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 NMES1Q9C002 83 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 RANBP3Q9H6Z4 567 aaPredicted RBP4.89□□□□□ -1.63
SDC4P-201ENST00000453285 METTL8Q9H825 291 aaKnown RBP4.89□□□□□ -1.63
SDC4P-201ENST00000453285 MMP26Q9NRE1 261 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 FAM212BQ9NTI7 297 aaPredicted RBP4.89□□□□□ -1.63
SDC4P-201ENST00000453285 BEX4Q9NWD9 120 aaPredicted RBP4.89□□□□□ -1.63
SDC4P-201ENST00000453285 TMED3Q9Y3Q3 217 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 ITPR2Q14571 2701 aa4.89□□□□□ -1.63
SDC4P-201ENST00000453285 NBPF19A0A087WUL8 3843 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 IGHV2-26A0A0B4J1V2 119 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 IGHV2-70DA0A0C4DH43 119 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 C5orf51A6NDU8 294 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 FAM25EA8MYX2 175 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 H0YIZ8 118 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms