RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 LY6G6CO95867 125 aa13.7□□□□□ -0.22
CHCHD3-203ENST00000448878 HMGN3Q15651 99 aa13.7□□□□□ -0.22
CHCHD3-203ENST00000448878 RPEL1Q2QD12 228 aa13.7□□□□□ -0.22
CHCHD3-203ENST00000448878 MOGAT2Q3SYC2 334 aa13.7□□□□□ -0.22
CHCHD3-203ENST00000448878 RNLSQ5VYX0 342 aa13.7□□□□□ -0.22
CHCHD3-203ENST00000448878 OR14A2Q96R54 314 aa13.7□□□□□ -0.22
CHCHD3-203ENST00000448878 RNF5Q99942 180 aa13.7□□□□□ -0.22
CHCHD3-203ENST00000448878 FGF20Q9NP95 211 aaPredicted RBP13.7□□□□□ -0.22
CHCHD3-203ENST00000448878 PNMA8CA0A1B0GUJ8 204 aa13.69□□□□□ -0.22
CHCHD3-203ENST00000448878 LOC100130705A0A1B0GUX0 176 aa13.69□□□□□ -0.22
CHCHD3-203ENST00000448878 CSN3P07498 182 aa13.69□□□□□ -0.22
CHCHD3-203ENST00000448878 SMN1Q16637 294 aaKnown RBP13.69□□□□□ -0.22
CHCHD3-203ENST00000448878 YIF1BQ5BJH7 314 aa13.69□□□□□ -0.22
CHCHD3-203ENST00000448878 SULT4A1Q9BR01 284 aa13.69□□□□□ -0.22
CHCHD3-203ENST00000448878 NEURL2Q9BR09 285 aa13.69□□□□□ -0.22
CHCHD3-203ENST00000448878 PARP12Q9H0J9 701 aaKnown RBP13.69□□□□□ -0.22
CHCHD3-203ENST00000448878 H3BUA1 57 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 BRI3O95415 125 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 LALBAP00709 142 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 MYL12AP19105 171 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 DCKP27707 260 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 CEACAM6P40199 344 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 DYRK1AQ13627 763 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 C6orf201Q7Z4U5 140 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 OR5AN1Q8NGI8 311 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 THAP7Q9BT49 309 aaPredicted RBP13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 SLC2A8Q9NY64 477 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 COA4Q9NYJ1 87 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 PEMTQ9UBM1 199 aa13.68□□□□□ -0.22
CHCHD3-203ENST00000448878 TNCP24821 2201 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 RBMY1BA6NDE4 496 aaKnown RBP13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 RBMY1EA6NEQ0 496 aaKnown RBP13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 H3BNX3 289 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 TRBV12-3P01733 135 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 RBMY1DP0C7P1 496 aaKnown RBP13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 FSTP19883 344 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 AADACP22760 399 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 LGALS7P47929 136 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 LINC00205P59089 165 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 CDH26Q8IXH8 852 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 DEFB125Q8N687 156 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 BVESQ8NE79 360 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 APH1BQ8WW43 257 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 PHB2Q99623 299 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 CLEC2DQ9UHP7 191 aa13.67□□□□□ -0.22
CHCHD3-203ENST00000448878 A0A0B4J203 849 aa13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 SPDEFO95238 335 aa13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 APOA2P02652 100 aa13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 IGKV1-16P04430 117 aa13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 APELAP0DMC3 54 aa13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 RPS11P62280 158 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 OR10K2Q6IF99 312 aa13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 LINC00322Q6ZN03 302 aaPredicted RBP13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 EDARADDQ8WWZ3 215 aa13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 LINC00476Q8WZB0 136 aa13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 SRD5A3Q9H8P0 318 aa13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 ZNF221Q9UK13 617 aa13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 EXOSC1Q9Y3B2 195 aaKnown RBP13.66□□□□□ -0.22
CHCHD3-203ENST00000448878 TRBV5-7A0A0A0MS05 114 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 CD7P09564 240 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 PJVKQ0ZLH3 352 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 MED21Q13503 144 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 GUCA2BQ16661 112 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 ZNF343Q6P1L6 599 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 SVOPQ8N4V2 548 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 DYNLRB2Q8TF09 96 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 SNAPC3Q92966 411 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 TINAGL1Q9GZM7 467 aaPredicted RBP13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 C11orf54Q9H0W9 315 aaPredicted RBP13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 SIGLEC8Q9NYZ4 499 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 OR1A1Q9P1Q5 309 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 GHRLQ9UBU3 117 aa13.65□□□□□ -0.22
CHCHD3-203ENST00000448878 IRGMA1A4Y4 181 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 OR11H12B2RN74 326 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 ATP5HO75947 161 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 ZBTB25P24278 435 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 PMS2P11Q13670 270 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 CD300EQ496F6 205 aaPredicted RBP13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 PDPNQ86YL7 162 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 NKAIN3Q8N8D7 197 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 OR2K2Q8NGT1 345 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 USMG5Q96IX5 58 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 PGLYRP3Q96LB9 341 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 SLC29A1Q99808 456 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 UQCC2Q9BRT2 126 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 AGMATQ9BSE5 352 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 C9orf16Q9BUW7 83 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 WFDC10AQ9H1F0 79 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 SLC35D1Q9NTN3 355 aa13.64□□□□□ -0.23
CHCHD3-203ENST00000448878 CXorf65A6NEN9 183 aa13.63□□□□□ -0.23
CHCHD3-203ENST00000448878 OR2A4O95047 310 aa13.63□□□□□ -0.23
CHCHD3-203ENST00000448878 ZNF383Q8NA42 475 aa13.63□□□□□ -0.23
CHCHD3-203ENST00000448878 ZNF555Q8NEP9 628 aa13.63□□□□□ -0.23
CHCHD3-203ENST00000448878 TMEM68Q96MH6 324 aa13.63□□□□□ -0.23
CHCHD3-203ENST00000448878 DERL3Q96Q80 235 aa13.63□□□□□ -0.23
CHCHD3-203ENST00000448878 ST6GALNAC5Q9BVH7 336 aa13.63□□□□□ -0.23
CHCHD3-203ENST00000448878 TMEM59Q9BXS4 323 aa13.63□□□□□ -0.23
CHCHD3-203ENST00000448878 PLEKHJ1Q9NW61 149 aa13.63□□□□□ -0.23
CHCHD3-203ENST00000448878 M0R1X1 148 aa13.62□□□□□ -0.23
CHCHD3-203ENST00000448878 ITGB1BP1O14713 200 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms