RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 CISD1Q9NZ45 108 aaKnown RBP10.9□□□□□ -0.66
SHC1-210ENST00000448116 IL17BQ9UHF5 180 aa10.9□□□□□ -0.66
SHC1-210ENST00000448116 CHD3Q12873 2000 aaKnown RBP10.9□□□□□ -0.66
SHC1-210ENST00000448116 SOD3P08294 240 aa10.9□□□□□ -0.66
SHC1-210ENST00000448116 GCNT2Q8N0V5 402 aa10.9□□□□□ -0.66
SHC1-210ENST00000448116 OPA3Q9H6K4 179 aa10.9□□□□□ -0.66
SHC1-210ENST00000448116 CDH20Q9HBT6 801 aa10.9□□□□□ -0.66
SHC1-210ENST00000448116 CLN8Q9UBY8 286 aa10.9□□□□□ -0.66
SHC1-210ENST00000448116 DMRT1Q9Y5R6 373 aa10.9□□□□□ -0.66
SHC1-210ENST00000448116 RAMP3O60896 148 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 NPSP0C0P6 89 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 PGA5P0DJD9 388 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 IL2RGP31785 369 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 PMP22Q01453 160 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 RNPS1Q15287 305 aaKnown RBP10.89□□□□□ -0.67
SHC1-210ENST00000448116 TBC1D28Q2M2D7 210 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 LRRC75BQ2VPJ9 315 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 TMEM164Q5U3C3 297 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 BTNL3Q6UXE8 466 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 ZNF826PQ6ZT77 177 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 LSM10Q969L4 123 aaKnown RBP10.89□□□□□ -0.67
SHC1-210ENST00000448116 PKIBQ9C010 78 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 KCNIP1Q9NZI2 227 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 SVILO95425 2214 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 TRBV6-6A0A0A6YYG2 114 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 SH2D1BO14796 132 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 LTC4SQ16873 150 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 WDR25Q64LD2 544 aaPredicted RBP10.89□□□□□ -0.67
SHC1-210ENST00000448116 ABHD5Q8WTS1 349 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 NANOS1Q8WY41 292 aaKnown RBP10.89□□□□□ -0.67
SHC1-210ENST00000448116 TAF15Q92804 592 aaKnown RBP eCLIP10.89□□□□□ -0.67
SHC1-210ENST00000448116 PLPPR2Q96GM1 343 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 SNX22Q96L94 193 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 WDR61Q9GZS3 305 aaKnown RBP10.89□□□□□ -0.67
SHC1-210ENST00000448116 OR2D2Q9H210 308 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 ARRDC1-AS1Q9H2J1 176 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 OBP2BQ9NPH6 170 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 TUBG2Q9NRH3 451 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 VAX2Q9UIW0 290 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 TRAV1-1A0A0B4J248 108 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 SS18L1O75177 396 aaPredicted RBP10.89□□□□□ -0.67
SHC1-210ENST00000448116 LYZL6O75951 148 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 IFNA1P01562 189 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 SNRPCP09234 159 aaKnown RBP10.89□□□□□ -0.67
SHC1-210ENST00000448116 PPP1CBP62140 327 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 SP5Q6BEB4 398 aaPredicted RBP10.89□□□□□ -0.67
SHC1-210ENST00000448116 C1orf210Q8IVY1 113 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 TPRX1Q8N7U7 411 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 OR52L2PQ8NGH6 319 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 WFDC12Q8WWY7 111 aa10.89□□□□□ -0.67
SHC1-210ENST00000448116 LRP5LA4QPB2 252 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 SEC14L6B5MCN3 397 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 WNT9BO14905 357 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 SLC25A6P12236 298 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 UBE2NP61088 152 aaKnown RBP10.88□□□□□ -0.67
SHC1-210ENST00000448116 TMEM41BQ5BJD5 291 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 ATP1A1-AS1Q5TC04 95 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 DMRTA1Q5VZB9 504 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 FBXW9Q5XUX1 488 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 ZNF497Q6ZNH5 498 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 RFESDQ8TAC1 157 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 SDF2L1Q9HCN8 221 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 POLDIP2Q9Y2S7 368 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 MAP1BP46821 2468 aaKnown RBP10.88□□□□□ -0.67
SHC1-210ENST00000448116 PCSK5Q92824 1860 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 PIGBOS1A0A0B4J2F0 54 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 CYB5R3P00387 301 aaPredicted RBP10.88□□□□□ -0.67
SHC1-210ENST00000448116 SP1P08047 785 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 DEFA4P12838 97 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 ACP1P24666 158 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 LINC00205P59089 165 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 AESQ08117 197 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 MRGPRGQ86SM5 289 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 MBD3L1Q8WWY6 194 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 BCL2L2Q92843 193 aaPredicted RBP10.88□□□□□ -0.67
SHC1-210ENST00000448116 WDYHV1Q96HA8 205 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 TREM2Q9NZC2 230 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 IGHV3-43A0A0B4J1X8 118 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 DEFB108AA8MXU0 73 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 B4DEV8 164 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 IGKV1D-33P01593 117 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 IGKV1-33P01594 117 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 IGHV3-43DP0DP04 118 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 TDGF1P13385 188 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 BMP5P22003 454 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 SERF2P84101 59 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 TMPRSS7Q7RTY8 843 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 RPP25LQ8N5L8 163 aaKnown RBP10.88□□□□□ -0.67
SHC1-210ENST00000448116 SLC25A40Q8TBP6 338 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 GATAD1Q8WUU5 269 aa10.88□□□□□ -0.67
SHC1-210ENST00000448116 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.87□□□□□ -0.67
SHC1-210ENST00000448116 ARG2P78540 354 aa10.87□□□□□ -0.67
SHC1-210ENST00000448116 RNF151Q2KHN1 245 aa10.87□□□□□ -0.67
SHC1-210ENST00000448116 NCR3LG1Q68D85 454 aa10.87□□□□□ -0.67
SHC1-210ENST00000448116 MOB1BQ7L9L4 216 aa10.87□□□□□ -0.67
SHC1-210ENST00000448116 FZR1Q9UM11 496 aa10.87□□□□□ -0.67
SHC1-210ENST00000448116 PSPNO60542 156 aa10.87□□□□□ -0.67
SHC1-210ENST00000448116 GABRA2P47869 451 aa10.87□□□□□ -0.67
SHC1-210ENST00000448116 RPL30P62888 115 aaKnown RBP10.87□□□□□ -0.67
SHC1-210ENST00000448116 PNRC1Q12796 327 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms