RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 ASPHD1Q5U4P2 390 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 CD200R1LQ6Q8B3 271 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 DRAXINQ8NBI3 349 aaPredicted RBP16.14■□□□□ 0.17
SDC1-205ENST00000447124 OR11H1Q8NG94 326 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 UBE2E2Q96LR5 201 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 GHITMQ9H3K2 345 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 C12orf4Q9NQ89 552 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 KIAA1456Q9P272 454 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 SCOCQ9UIL1 159 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 MGAT4AQ9UM21 535 aa16.14■□□□□ 0.17
SDC1-205ENST00000447124 TRAV1-2A0A0B4J238 106 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 OR5H14A6NHG9 310 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 HSPA12AO43301 675 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 SOX15O60248 233 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 CD3GP09693 182 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 MC5RP33032 325 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 HSPA13P48723 471 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 DGCR2P98153 550 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 ZNF660Q6AZW8 331 aaPredicted RBP16.13■□□□□ 0.17
SDC1-205ENST00000447124 ZNF383Q8NA42 475 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 OR5M8Q8NGP6 311 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 EDARADDQ8WWZ3 215 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 GAB2Q9UQC2 676 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 NUBP2Q9Y5Y2 271 aa16.13■□□□□ 0.17
SDC1-205ENST00000447124 A0A0B4J203 849 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 TRDV1A0A1B0GX56 115 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 ERICH4A6NGS2 130 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 GSTP1P09211 210 aaKnown RBP16.12■□□□□ 0.17
SDC1-205ENST00000447124 CRIP2P52943 208 aaPredicted RBP16.12■□□□□ 0.17
SDC1-205ENST00000447124 TMEM65Q6PI78 240 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 OR1N2Q8NGR9 330 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 OR5B12Q96R08 314 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 TOLLIPQ9H0E2 274 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 RDH8Q9NYR8 311 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 RAB26Q9ULW5 256 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 VSIG4Q9Y279 399 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 WASHC3Q9Y3C0 194 aa16.12■□□□□ 0.17
SDC1-205ENST00000447124 IFITM5A6NNB3 132 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 H7C2Y5 167 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 RAB27BO00194 218 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 GNB1P62873 340 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 RUNX1Q01196 453 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 PSG5Q15238 335 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 C11orf87Q6NUJ2 197 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 NR2C2APQ86WQ0 139 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 CASTOR1Q8WTX7 329 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 RAB3CQ96E17 227 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 CLCC1Q96S66 551 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 RNF5Q99942 180 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 NDUFB11Q9NX14 153 aa16.11■□□□□ 0.17
SDC1-205ENST00000447124 PDCD5O14737 125 aa16.1■□□□□ 0.17
SDC1-205ENST00000447124 RBBP9O75884 186 aa16.1■□□□□ 0.17
SDC1-205ENST00000447124 IGKV1-16P04430 117 aa16.1■□□□□ 0.17
SDC1-205ENST00000447124 GSTT2P0CG29 244 aa16.1■□□□□ 0.17
SDC1-205ENST00000447124 GSTT2BP0CG30 244 aa16.1■□□□□ 0.17
SDC1-205ENST00000447124 ECSCRQ19T08 205 aa16.1■□□□□ 0.17
SDC1-205ENST00000447124 IGSF11Q5DX21 431 aa16.1■□□□□ 0.17
SDC1-205ENST00000447124 C9orf66Q5T8R8 295 aa16.1■□□□□ 0.17
SDC1-205ENST00000447124 OR10R2Q8NGX6 335 aa16.1■□□□□ 0.17
SDC1-205ENST00000447124 BLOC1S6Q9UL45 172 aa16.1■□□□□ 0.17
SDC1-205ENST00000447124 SEC14L6B5MCN3 397 aa16.09■□□□□ 0.17
SDC1-205ENST00000447124 FABP7O15540 132 aa16.09■□□□□ 0.17
SDC1-205ENST00000447124 GNB3P16520 340 aa16.09■□□□□ 0.17
SDC1-205ENST00000447124 OR4A4PQ8NGN8 299 aa16.09■□□□□ 0.17
SDC1-205ENST00000447124 MAFIPQ8WZ33 124 aa16.09■□□□□ 0.17
SDC1-205ENST00000447124 FAM103A1Q9BTL3 118 aaKnown RBP16.09■□□□□ 0.17
SDC1-205ENST00000447124 ALX4Q9H161 411 aaPredicted RBP16.09■□□□□ 0.17
SDC1-205ENST00000447124 ZNF230Q9UIE0 474 aaPredicted RBP16.09■□□□□ 0.17
SDC1-205ENST00000447124 ZNF221Q9UK13 617 aa16.09■□□□□ 0.17
SDC1-205ENST00000447124 A3GALT2U3KPV4 340 aa16.09■□□□□ 0.17
SDC1-205ENST00000447124 A0A1W2PN81 502 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 MFNGO00587 321 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 RAMP3O60896 148 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 FCGR3AP08637 254 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 RAB3BP20337 219 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 CHRNA7P36544 502 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 RANBP1P43487 201 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 PLGLAQ15195 96 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 VAX1Q5SQQ9 334 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 C22orf42Q6IC83 251 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 C5orf30Q96GV9 206 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 B9D2Q9BPU9 175 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 TPSG1Q9NRR2 321 aa16.08■□□□□ 0.16
SDC1-205ENST00000447124 METTL1Q9UBP6 276 aaKnown RBP16.08■□□□□ 0.16
SDC1-205ENST00000447124 LSM4Q9Y4Z0 139 aaKnown RBP16.08■□□□□ 0.16
SDC1-205ENST00000447124 M0R1X1 148 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 TFAP2AP05549 437 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 OR8U9P0C7N5 309 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 RAB6AP20340 208 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 RPS16P62249 146 aaKnown RBP16.07■□□□□ 0.16
SDC1-205ENST00000447124 ZNF616Q08AN1 781 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 ZNF260Q3ZCT1 412 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 ZNF562Q6V9R5 426 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 PPP1R27Q86WC6 154 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 SPARTQ8N0X7 666 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 DCUN1D4Q92564 292 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 PRR25Q96S07 402 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 CABLES2Q9BTV7 478 aa16.07■□□□□ 0.16
SDC1-205ENST00000447124 ZMAT5Q9UDW3 170 aaKnown RBP16.07■□□□□ 0.16
SDC1-205ENST00000447124 ELF5Q9UKW6 265 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms