RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 MMDQ15546 238 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 SRSF7Q16629 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
TREX1-202ENST00000444177 PNLIPRP3Q17RR3 467 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 RPL39P5Q59GN2 51 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 FAM71F2Q6NXP2 309 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 MZT2AQ6P582 158 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 FOXRED2Q8IWF2 684 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 OR4A4PQ8NGN8 299 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 S100A16Q96FQ6 103 aaKnown RBP11.07□□□□□ -0.64
TREX1-202ENST00000444177 ABHD14BQ96IU4 210 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 NOL4LQ96MY1 436 aaPredicted RBP11.07□□□□□ -0.64
TREX1-202ENST00000444177 S1PR3Q99500 378 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 DIABLOQ9NR28 239 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 NECAP2Q9NVZ3 263 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 CCDC59Q9P031 241 aaKnown RBP11.07□□□□□ -0.64
TREX1-202ENST00000444177 NDUFA13Q9P0J0 144 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 LINC00527Q9UJ94 153 aa11.07□□□□□ -0.64
TREX1-202ENST00000444177 IGKV1-6A0A0C4DH72 117 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 SMIM31A0A1B0GVY4 71 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 BET1O15155 118 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 APOA1P02647 267 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 IGLL1P15814 213 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 F2RL1P55085 397 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 KIR2DS1Q14954 304 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 ZNF260Q3ZCT1 412 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 ZNF329Q86UD4 541 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 SAMD12Q8N8I0 201 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 OR8H1Q8NGG4 311 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 DYNC2LI1Q8TCX1 351 aa11.06□□□□□ -0.64
TREX1-202ENST00000444177 C11orf54Q9H0W9 315 aaPredicted RBP11.06□□□□□ -0.64
TREX1-202ENST00000444177 RSL24D1Q9UHA3 163 aaKnown RBP11.06□□□□□ -0.64
TREX1-202ENST00000444177 ZNF230Q9UIE0 474 aaPredicted RBP11.06□□□□□ -0.64
TREX1-202ENST00000444177 ITGB1BP1O14713 200 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 XRCC3O43542 346 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 DIRAS3O95661 229 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 IGHG2P01859 326 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 GSTT2P0CG29 244 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 GSTT2BP0CG30 244 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 DTYMKP23919 212 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 GPR12P47775 334 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 ACTBP60709 375 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 CDNFQ49AH0 187 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 HACD4Q5VWC8 232 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 FOXB2Q5VYV0 432 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 FAM131AQ6UXB0 335 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 GLDNQ6ZMI3 551 aaPredicted RBP11.05□□□□□ -0.64
TREX1-202ENST00000444177 Q6ZS49 121 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 MRAPQ8TCY5 172 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 DNAH3Q8TD57 4116 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 CHPT1Q8WUD6 406 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 ZNF251Q9BRH9 671 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 CABLES2Q9BTV7 478 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 PLSCR3Q9NRY6 295 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 AURKAIP1Q9NWT8 199 aaPredicted RBP11.05□□□□□ -0.64
TREX1-202ENST00000444177 RDH8Q9NYR8 311 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 ELF5Q9UKW6 265 aaPredicted RBP11.05□□□□□ -0.64
TREX1-202ENST00000444177 RNF150Q9ULK6 438 aa11.05□□□□□ -0.64
TREX1-202ENST00000444177 AP4M1O00189 453 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 TPPPO94811 219 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 PF4P02776 101 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 SLC35B1P78383 322 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 IGSF11Q5DX21 431 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 STPG2Q8N412 459 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 FAM71E2Q8N5Q1 922 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 OR10J5Q8NHC4 309 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 HSPB9Q9BQS6 159 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 GINS4Q9BRT9 223 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 GHITMQ9H3K2 345 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 COMMD3Q9UBI1 195 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 ZNF221Q9UK13 617 aa11.04□□□□□ -0.64
TREX1-202ENST00000444177 TMEM235A6NFC5 223 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 CCDC160A6NGH7 325 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 LINC01548A6NM66 108 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 H7C2Y5 167 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 NBR2O15453 112 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 CNTFRP26992 372 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 GNG2P59768 71 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 NUDCD2Q8WVJ2 157 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 RITA1Q96K30 269 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 AGMATQ9BSE5 352 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 OR2D2Q9H210 308 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 KIAA1456Q9P272 454 aa11.03□□□□□ -0.64
TREX1-202ENST00000444177 ZNF107Q9UII5 783 aaPredicted RBP11.03□□□□□ -0.64
TREX1-202ENST00000444177 TRAV18A0A075B6X5 111 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 TRBV6-7A0A0A0MS04 114 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 OR5H14A6NHG9 310 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 H0YJW9 148 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 M0R1X1 148 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 EIF4EP06730 217 aaKnown RBP11.02□□□□□ -0.65
TREX1-202ENST00000444177 CT45A6P0DMU7 189 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 CT45A5P0DMU8 189 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 CT45A7P0DMV0 189 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 VDAC1P21796 283 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 TMEM69Q5SWH9 247 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 DRAXINQ8NBI3 349 aaPredicted RBP11.02□□□□□ -0.65
TREX1-202ENST00000444177 RCC1LQ96I51 464 aaKnown RBP11.02□□□□□ -0.65
TREX1-202ENST00000444177 ST6GALNAC5Q9BVH7 336 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 SLIRPQ9GZT3 109 aaKnown RBP11.02□□□□□ -0.65
TREX1-202ENST00000444177 AUNIPQ9H7T9 357 aa11.02□□□□□ -0.65
TREX1-202ENST00000444177 WASHC3Q9Y3C0 194 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms