RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ZNF701M0R085 212 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-211ENST00000443563 HLA-DQB1P01920 261 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 APOA2P02652 100 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 LUMP51884 338 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-211ENST00000443563 BLCAPP62952 87 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 CBX3Q13185 183 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 ABCA11PQ4W5N1 156 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 RPL39P5Q59GN2 51 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 Q8N6K4 173 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 GVQW1Q8N7I0 195 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 C5orf56Q8N8D9 126 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 OR5AP2Q8NGF4 316 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 EXTL2Q9UBQ6 330 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 RNF150Q9ULK6 438 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 OR2W1Q9Y3N9 320 aa8.64□□□□□ -1.03
HDAC6-211ENST00000443563 H7C2Y5 167 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 RBBP9O75884 186 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 CT45A6P0DMU7 189 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 CT45A5P0DMU8 189 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 CT45A7P0DMV0 189 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 PTHLHP12272 177 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 TAS2R46P59540 309 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 CDK10Q15131 360 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 SNX29P2Q8IUI4 249 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 ZNF645Q8N7E2 425 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 OR5AN1Q8NGI8 311 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 GPX8Q8TED1 209 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 ADTRPQ96IZ2 230 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 RNF5Q99942 180 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 RASL11BQ9BPW5 248 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 LIN7CQ9NUP9 197 aaKnown RBP8.63□□□□□ -1.03
HDAC6-211ENST00000443563 NDUFA13Q9P0J0 144 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 KIAA1456Q9P272 454 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 RSL24D1Q9UHA3 163 aaKnown RBP8.63□□□□□ -1.03
HDAC6-211ENST00000443563 ANAPC10Q9UM13 185 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 WASHC3Q9Y3C0 194 aa8.63□□□□□ -1.03
HDAC6-211ENST00000443563 MEIS3P1A6NDR6 274 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 ZNF736B4DX44 427 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-211ENST00000443563 M0R1X1 148 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 TUSC2O75896 110 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 AMY1AP04745 511 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 AMY2AP04746 511 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 OR5H8P0DN80 308 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 VSIG10L2P0DP72 767 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 RRASP10301 218 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 NAT1P18440 290 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 NFYAP23511 347 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-211ENST00000443563 RCVRNP35243 200 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 THBS3P49746 956 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 ACTBP60709 375 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 MRPS10P82664 201 aaKnown RBP8.62□□□□□ -1.03
HDAC6-211ENST00000443563 MMDQ15546 238 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 FBLN7Q53RD9 439 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 C9orf152Q5JTZ5 239 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 FAM131AQ6UXB0 335 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 PDPNQ86YL7 162 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 LAX1Q8IWV1 398 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 KLHDC1Q8N7A1 406 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 SGMS2Q8NHU3 365 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 GIMAP1Q8WWP7 306 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 SNAPC3Q92966 411 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 BORCS5Q969J3 196 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 CITED1Q99966 193 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 SLIRPQ9GZT3 109 aaKnown RBP8.62□□□□□ -1.03
HDAC6-211ENST00000443563 C6orf62Q9GZU0 229 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-211ENST00000443563 SERTAD4Q9NUC0 356 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 SDHAF2Q9NX18 166 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 SIGLEC9Q9Y336 463 aa8.62□□□□□ -1.03
HDAC6-211ENST00000443563 H0YJW9 148 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 CTDSP2O14595 271 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 NBR2O15453 112 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 KCNAB3O43448 404 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 FCGR2CP31995 323 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 MSMO1Q15800 293 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 RTL8BQ17RB0 113 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 ACTBL2Q562R1 376 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 FOXRED2Q8IWF2 684 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 FAM71E2Q8N5Q1 922 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 Q8N9W7 124 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 NPBQ8NG41 125 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 OR5H2Q8NGV7 314 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 MCFD2Q8NI22 146 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 FCAMRQ8WWV6 532 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 TSNAXQ99598 290 aaKnown RBP8.61□□□□□ -1.03
HDAC6-211ENST00000443563 RBM38Q9H0Z9 239 aaKnown RBP8.61□□□□□ -1.03
HDAC6-211ENST00000443563 MIXL1Q9H2W2 232 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 PLSCR3Q9NRY6 295 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 SLC35D1Q9NTN3 355 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 EHFQ9NZC4 300 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 PKD1L1Q8TDX9 2849 aa8.61□□□□□ -1.03
HDAC6-211ENST00000443563 J3QRK9 145 aa8.6□□□□□ -1.03
HDAC6-211ENST00000443563 PROP1O75360 226 aa8.6□□□□□ -1.03
HDAC6-211ENST00000443563 NDUFA3O95167 84 aa8.6□□□□□ -1.03
HDAC6-211ENST00000443563 PPYP01298 95 aa8.6□□□□□ -1.03
HDAC6-211ENST00000443563 IGHG2P01859 326 aa8.6□□□□□ -1.03
HDAC6-211ENST00000443563 FCER2P06734 321 aa8.6□□□□□ -1.03
HDAC6-211ENST00000443563 F2RL1P55085 397 aa8.6□□□□□ -1.03
HDAC6-211ENST00000443563 HERV-K104P61576 105 aa8.6□□□□□ -1.03
HDAC6-211ENST00000443563 SSBP1Q04837 148 aaKnown RBP8.6□□□□□ -1.03
HDAC6-211ENST00000443563 DYRK1AQ13627 763 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms