RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 POC1AQ8NBT0 407 aa19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 SNX22Q96L94 193 aa19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 TUBD1Q9UJT1 453 aa19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 TPPP2P59282 170 aa19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 SLC16A13Q7RTY0 426 aa19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 MFSD2BA6NFX1 497 aa19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 HOXD4P09016 255 aaPredicted RBP19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 FAM157CP0CG43 387 aa19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 Q6ZT83 130 aa19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 TLNRD1Q9H1K6 362 aa19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 THADAQ6YHU6 1953 aa19.19■□□□□ 0.66
CTDSPL-206ENST00000443503 ID4P47928 161 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 CAMPP49913 170 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 KLF7O75840 302 aaPredicted RBP19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 ZDHHC16Q969W1 377 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 TP53RKQ96S44 253 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 PLXNA3P51805 1871 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 PHF3Q92576 2039 aaKnown RBP19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 ZNF407Q9C0G0 2248 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 OR5P3Q8WZ94 311 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 ZNF319Q9P2F9 582 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 MSGN1A6NI15 193 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 OR4A8P0C604 315 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 BCL2P10415 239 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 CTSSP25774 331 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 PDPNQ86YL7 162 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 ZNF645Q8N7E2 425 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 TM2D1Q9BX74 207 aa19.18■□□□□ 0.66
CTDSPL-206ENST00000443503 FAM74A7A6NL05 159 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 FAM74A3Q4VXF1 159 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 FAM162BQ5T6X4 162 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 DHRS7BQ6IAN0 325 aaPredicted RBP19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 TMEM105Q8N8V8 129 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 SLC24A4Q8NFF2 622 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 OR4C12Q96R67 309 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 LYRM2Q9NU23 88 aaPredicted RBP19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 B4DEV8 164 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 EFNA2O43921 213 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 EIF3GO75821 320 aaKnown RBP eCLIP19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 UCP3P55916 312 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 ASCL5Q7RTU5 278 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 OR4X1Q8NH49 305 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 OR51B2Q9Y5P1 312 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 GFI1Q99684 422 aa19.17■□□□□ 0.66
CTDSPL-206ENST00000443503 TOMM20LQ6UXN7 152 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 HEXA-AS1Q9H8Q6 139 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 ABCA4P78363 2273 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 WNT9BO14905 357 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 SLC31A2O15432 143 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 RHBDL1O75783 438 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 PMS2P11Q13670 270 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 ZNF714Q96N38 554 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 CALYQ9NYX4 217 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 IGKV1-9A0A0C4DH69 117 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 ZFP36L1Q07352 338 aaKnown RBP19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 ZNF273Q14593 569 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 RNF2Q99496 336 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 NPVFQ9HCQ7 196 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 COL4A6Q14031 1691 aa19.16■□□□□ 0.66
CTDSPL-206ENST00000443503 IGHV3-72A0A0B4J1Y9 119 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 LRRC3CA6NJW4 275 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 MMDQ15546 238 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 VWA1Q6PCB0 445 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 OR10S1Q8NGN2 331 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 RBKSQ9H477 322 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 RNF24Q9Y225 148 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 IGHV3-21A0A0B4J1V1 117 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 C9orf172C9J069 976 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 GNG7O60262 68 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 FHITP49789 147 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 LEAP2Q969E1 77 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 NOL4LQ96MY1 436 aaPredicted RBP19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 TMEM204Q9BSN7 226 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 IGLV3-32A0A0A0MS00 114 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 SNRPCP09234 159 aaKnown RBP19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 DEPPQ9NTK1 212 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 ARL2-SNX15V9GYD0 113 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 SPCS3P61009 180 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 TCTEX1D1Q8N7M0 179 aa19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 REPIN1Q9BWE0 567 aaKnown RBP19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 WDR61Q9GZS3 305 aaKnown RBP19.15■□□□□ 0.66
CTDSPL-206ENST00000443503 SUMO1P63165 101 aaKnown RBP19.14■□□□□ 0.66
CTDSPL-206ENST00000443503 TAF15Q92804 592 aaKnown RBP eCLIP19.14■□□□□ 0.66
CTDSPL-206ENST00000443503 MS4A10Q96PG2 267 aa19.14■□□□□ 0.66
CTDSPL-206ENST00000443503 SH3BGRL3Q9H299 93 aa19.14■□□□□ 0.66
CTDSPL-206ENST00000443503 FER1L5A0AVI2 2057 aa19.14■□□□□ 0.65
CTDSPL-206ENST00000443503 S100A4P26447 101 aaKnown RBP19.14■□□□□ 0.65
CTDSPL-206ENST00000443503 MEOX2P50222 304 aa19.14■□□□□ 0.65
CTDSPL-206ENST00000443503 DRAM1Q8N682 238 aa19.14■□□□□ 0.65
CTDSPL-206ENST00000443503 GCSAMQ8N6F7 178 aa19.14■□□□□ 0.65
CTDSPL-206ENST00000443503 SSTR5P35346 364 aa19.14■□□□□ 0.65
CTDSPL-206ENST00000443503 PTGDSP41222 190 aa19.14■□□□□ 0.65
CTDSPL-206ENST00000443503 RPEL1Q2QD12 228 aa19.14■□□□□ 0.65
CTDSPL-206ENST00000443503 SMDT1Q9H4I9 107 aa19.14■□□□□ 0.65
CTDSPL-206ENST00000443503 MED13LQ71F56 2210 aa19.14■□□□□ 0.65
CTDSPL-206ENST00000443503 PRR19A6NJB7 356 aa19.13■□□□□ 0.65
CTDSPL-206ENST00000443503 SEC14L6B5MCN3 397 aa19.13■□□□□ 0.65
CTDSPL-206ENST00000443503 NAT2P11245 290 aa19.13■□□□□ 0.65
CTDSPL-206ENST00000443503 TNFSF10P50591 281 aa19.13■□□□□ 0.65
CTDSPL-206ENST00000443503 FAM131CQ96AQ9 280 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms