RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 CCDC115Q96NT0 180 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 SERPINI1Q99574 410 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 TMEM147Q9BVK8 224 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 HMG20AQ9NP66 347 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 ZNF331Q9NQX6 463 aaPredicted RBP3.32□□□□□ -1.88
VPS50-206ENST00000443443 DHRS4-AS1Q9P1J3 65 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 BTRCQ9Y297 605 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 F11RQ9Y624 299 aaKnown RBP3.32□□□□□ -1.88
VPS50-206ENST00000443443 PXMP4Q9Y6I8 212 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 NFASCO94856 1347 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 POGZQ7Z3K3 1410 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 ZNF518AQ6AHZ1 1483 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 TDRD6O60522 2096 aaKnown RBP3.32□□□□□ -1.88
VPS50-206ENST00000443443 PTPRGP23470 1445 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 PTPRJQ12913 1337 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 IGKV1-27A0A075B6S5 117 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 FAM168BA1KXE4 195 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 CCDC160A6NGH7 325 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 ZNF705GA8MUZ8 300 aaPredicted RBP3.31□□□□□ -1.88
VPS50-206ENST00000443443 GYG2O15488 501 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 TCF21O43680 179 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 IFNA10P01566 189 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 HLA-DRB1P01911 266 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 CPMP14384 443 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 ZNF30P17039 623 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 NUDT1P36639 197 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 POLR2IP36954 125 aaKnown RBP3.31□□□□□ -1.88
VPS50-206ENST00000443443 CRADDP78560 199 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 ZNF616Q08AN1 781 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 EGFEM1PQ0D2K5 195 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 FABP9Q0Z7S8 132 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 SSX1Q16384 188 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 ZNF773Q6PK81 442 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 AGTRAPQ6RW13 159 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 SBSNQ6UWP8 590 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 ACP7Q6ZNF0 438 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 C3orf62Q6ZUJ4 267 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 LINC00596Q86U02 117 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 DRAM1Q8N682 238 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 ZIC4Q8N9L1 334 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 DCAF4L2Q8NA75 395 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 OR4K15Q8NH41 348 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 ORAOV1Q8WV07 137 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 GALMQ96C23 342 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 REEP6Q96HR9 211 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 KCNS1Q96KK3 526 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 HSD17B10Q99714 261 aaKnown RBP3.31□□□□□ -1.88
VPS50-206ENST00000443443 COMMD5Q9GZQ3 224 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 CHST6Q9GZX3 395 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 VCXQ9H320 206 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 ZNF702PQ9H963 129 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 KLF13Q9Y2Y9 288 aaPredicted RBP3.31□□□□□ -1.88
VPS50-206ENST00000443443 PCYT1BQ9Y5K3 369 aaPredicted RBP3.31□□□□□ -1.88
VPS50-206ENST00000443443 RFNGQ9Y644 331 aa3.31□□□□□ -1.88
VPS50-206ENST00000443443 UHRF1BP1Q6BDS2 1440 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 CNTLNQ9NXG0 1405 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 IGLV8-61A0A075B6I0 122 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 hCG_1818297A0A087WSY0 165 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 A0A0X1KG70 313 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 TMEM189A5PLL7 270 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 A8MT66 165 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 J3KT08 172 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 FAM107AO95990 144 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 C1QCP02747 245 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 HLA-DPB1P04440 258 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 C8GP07360 202 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 SOD3P08294 240 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 LGALS1P09382 135 aaKnown RBP3.3□□□□□ -1.88
VPS50-206ENST00000443443 RAB13P51153 203 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 DEFA1P59665 94 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 RPS28P62857 69 aaKnown RBP3.3□□□□□ -1.88
VPS50-206ENST00000443443 DAZ2Q13117 558 aaKnown RBP3.3□□□□□ -1.88
VPS50-206ENST00000443443 BAMBIQ13145 260 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 RHEBQ15382 184 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 IBA57Q5T440 356 aaKnown RBP3.3□□□□□ -1.88
VPS50-206ENST00000443443 GLYATQ6IB77 296 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 DAZ4Q86SG3 579 aaKnown RBP3.3□□□□□ -1.88
VPS50-206ENST00000443443 LY6G5BQ8NDX9 201 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 CANT1Q8WVQ1 401 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 GHSRQ92847 366 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 RPUSD4Q96CM3 377 aaKnown RBP3.3□□□□□ -1.88
VPS50-206ENST00000443443 LYSMD1Q96S90 227 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 TIMM17AQ99595 171 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 DOHHQ9BU89 302 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 TMEM222Q9H0R3 208 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 LINC00597Q9H2U6 94 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 OR52D1Q9H346 318 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 CDC42EP4Q9H3Q1 356 aaKnown RBP3.3□□□□□ -1.88
VPS50-206ENST00000443443 DAZ1Q9NQZ3 744 aaKnown RBP3.3□□□□□ -1.88
VPS50-206ENST00000443443 DAZ3Q9NR90 486 aaKnown RBP3.3□□□□□ -1.88
VPS50-206ENST00000443443 MED11Q9P086 117 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 HSPB8Q9UJY1 196 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 RBM7Q9Y580 266 aaKnown RBP3.3□□□□□ -1.88
VPS50-206ENST00000443443 TAF1LQ8IZX4 1826 aa3.3□□□□□ -1.88
VPS50-206ENST00000443443 ARAP1Q96P48 1450 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 MRC2Q9UBG0 1479 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 DCCP43146 1447 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 SMG6Q86US8 1419 aaKnown RBP3.29□□□□□ -1.88
VPS50-206ENST00000443443 OR4C45A6NMZ5 311 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 NDUFC2-KCTD14E9PQ53 114 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms