RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 OR10AG1Q8NH19 301 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 OR4A5Q8NH83 315 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 RNF183Q96D59 192 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 PELI1Q96FA3 418 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 MCHR1Q99705 422 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 SMR3AQ99954 134 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 WDR61Q9GZS3 305 aaKnown RBP2.4□□□□□ -2.02
LIG4-203ENST00000442234 ZNF703Q9H7S9 590 aaPredicted RBP2.4□□□□□ -2.02
LIG4-203ENST00000442234 GP6Q9HCN6 339 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.4□□□□□ -2.02
LIG4-203ENST00000442234 MED29Q9NX70 200 aa2.4□□□□□ -2.02
LIG4-203ENST00000442234 TNRC6AQ8NDV7 1962 aaKnown RBP2.4□□□□□ -2.02
LIG4-203ENST00000442234 DOCK11Q5JSL3 2073 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 SNRNP200O75643 2136 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 IGKV6D-21A0A0A0MT36 114 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 NSG1A0A0A6YYJ2 146 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 IGHV2-26A0A0B4J1V2 119 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 TRAV8-6A0A0B4J262 113 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 A0A1W2PPC4 97 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 CCL21O00585 134 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 PLPP3O14495 311 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 TAX1BP3O14907 124 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 HMGB3O15347 200 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 RAMP2O60895 175 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 RAD51DO75771 328 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 IGLC1P0CG04 106 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 MPC1LP0DKB6 136 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 HIST1H1EP10412 219 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 ATP6V0CP27449 155 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 TIMP3P35625 211 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 EFNB2P52799 333 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 CLDN15P56746 228 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 RBM11P57052 281 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 SSBP2P81877 361 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 MEF2BQ02080 365 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 MFGE8Q08431 387 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 PLCXD2Q0VAA5 305 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 PRSS8Q16651 343 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 MEP1BQ16820 701 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 RPEL1Q2QD12 228 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 HLA-DRB5Q30154 266 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 KIAA1644Q3SXP7 199 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 TRMT12Q53H54 448 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 PRR31Q5SQ13 230 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 CDCP2Q5VXM1 449 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 FAM71E1Q6IPT2 247 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 SBSNQ6UWP8 590 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 GFRALQ6UXV0 394 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 C19orf35Q6ZS72 473 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 COMMD6Q7Z4G1 85 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 MRGPRGQ86SM5 289 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 BATF2Q8N1L9 274 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 TMEM251Q8N6I4 163 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 C1orf162Q8NEQ5 155 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 OR5A1Q8NGJ0 315 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 OR52E2Q8NGJ4 325 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 GNPNAT1Q96EK6 184 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 P2RX4Q99571 388 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 C19orf24Q9BVV8 132 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 VN1R1Q9GZP7 353 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 DOCK5Q9H7D0 1870 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 SDF2L1Q9HCN8 221 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 HRASLS2Q9NWW9 162 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 OR1A1Q9P1Q5 309 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 MRM2Q9UI43 246 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 ZNF391Q9UJN7 358 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 CYSLTR1Q9Y271 337 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 VDAC3Q9Y277 283 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 PTRH2Q9Y3E5 179 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 KBTBD11-OT1A0A1B0GTJ5 212 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 LOC102723971A0A1B0GUV8 181 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 hCG_38984A0A1B0GV85 526 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 C1orf226A1L170 272 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 FAM231BA6NCW3 169 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 C17orf112F2Z3M2 114 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 BMPR1BO00238 502 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 SIRPB1O00241 398 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 SH2D1BO14796 132 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 MPPED1O15442 326 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 CD5LO43866 347 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 CLEC3AO75596 197 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 WISP3O95389 354 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 NRASP01111 189 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 KRASP01116 189 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 HLA-DQA2P01906 255 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 BCL2P10415 239 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 HIST1H1DP16402 221 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 HIST1H1CP16403 213 aaKnown RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 WT1P19544 449 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 ALOX5APP20292 161 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 HTR1DP28221 377 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 PSMB3P49720 205 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 GFERP55789 205 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 HERV-K104P61576 105 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 HIST1H1AQ02539 215 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 MEF2CQ06413 473 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 IL13RA2Q14627 380 aa2.4□□□□□ -2.03
LIG4-203ENST00000442234 TMEM176BQ3YBM2 270 aaPredicted RBP2.4□□□□□ -2.03
LIG4-203ENST00000442234 TM4SF20Q53R12 229 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms