RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 TBL2Q9Y4P3 447 aaKnown RBP6.43□□□□□ -1.38
HDAC9-214ENST00000441542 NCOA6Q14686 2063 aaPredicted RBP6.43□□□□□ -1.38
HDAC9-214ENST00000441542 PRR19A6NJB7 356 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 LIPT2A6NK58 231 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 F6UZH7 168 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 SYNGR2O43760 224 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TUSC2O75896 110 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TCN2P20062 427 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 NPPCP23582 126 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 EPHA8P29322 1005 aaPredicted RBP6.42□□□□□ -1.38
HDAC9-214ENST00000441542 EDDM3BP56851 147 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 ID3Q02535 119 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TFF3Q07654 80 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TMEM196Q5HYL7 178 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 SPATA46Q5T0L3 261 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 HAPLN4Q86UW8 402 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF738Q8NE65 137 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TSTD1Q8NFU3 115 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF488Q96MN9 340 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 PYGO2Q9BRQ0 406 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 MOB1AQ9H8S9 216 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 LOC102725191A0A1B0GVB3 256 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 SLC22A20A6NK97 555 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 CLEC3BP05452 202 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 PSG1P11464 419 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 LHX2P50458 406 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 PDLIM4P50479 330 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 KLF3P57682 345 aaPredicted RBP6.42□□□□□ -1.38
HDAC9-214ENST00000441542 FBLN7Q53RD9 439 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 Q56UQ5 140 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 PHYHD1Q5SRE7 291 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 WDR5BQ86VZ2 330 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 LRTM2Q8N967 370 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 OR5P3Q8WZ94 311 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 C20orf144Q9BQM9 153 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TM2D1Q9BX74 207 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 HIPK2Q9H2X6 1198 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 CLN8Q9UBY8 286 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 LOC105371242A0A075B767 164 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 OR6C6A6NF89 314 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 RBFOX2O43251 390 aaKnown RBP eCLIP6.42□□□□□ -1.38
HDAC9-214ENST00000441542 PDCD6O75340 191 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 HYPMO75409 117 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 VAMP5O95183 116 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 NRASP01111 189 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TNFP01375 233 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 CXCL10P02778 98 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TCTAP57738 103 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 HBG1P69891 147 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 HBG2P69892 147 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 SRPXP78539 464 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 MRPL54Q6P161 138 aaKnown RBP6.42□□□□□ -1.38
HDAC9-214ENST00000441542 GCNT2Q8N0V5 402 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 CPT1CQ8TCG5 803 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TAF15Q92804 592 aaKnown RBP eCLIP6.42□□□□□ -1.38
HDAC9-214ENST00000441542 PNRC2Q9NPJ4 139 aaKnown RBP6.42□□□□□ -1.38
HDAC9-214ENST00000441542 NAT8BQ9UHF3 227 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TCFL5Q9UL49 500 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 TP53TG3Q9ULZ0 132 aa6.42□□□□□ -1.38
HDAC9-214ENST00000441542 KRASP01116 189 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 STAG3L2P0CL84 134 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 MGST1P10620 155 aaKnown RBP6.41□□□□□ -1.38
HDAC9-214ENST00000441542 RANP62826 216 aaKnown RBP6.41□□□□□ -1.38
HDAC9-214ENST00000441542 UBE2V1Q13404 147 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 NMSQ5H8A3 153 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 OR4A47Q6IF82 309 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 SHISA2Q6UWI4 295 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 OR5L2Q8NGL0 311 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 P2RX4Q99571 388 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 C11orf1Q9H5F2 150 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 GPR27Q9NS67 375 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 SERTAD4Q9NUC0 356 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 PXMP4Q9Y6I8 212 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 REV3LO60673 3130 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 VPS13AQ96RL7 3174 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 PGLYRP1O75594 196 aaPredicted RBP6.41□□□□□ -1.38
HDAC9-214ENST00000441542 CCL2P13500 99 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 MC5RP33032 325 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 RPL15P61313 204 aaKnown RBP6.41□□□□□ -1.38
HDAC9-214ENST00000441542 GRB2P62993 217 aaKnown RBP6.41□□□□□ -1.38
HDAC9-214ENST00000441542 FXYD3Q14802 87 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 TEX43Q6ZNM6 134 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 FAM58AQ8N1B3 248 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF808Q8N4W9 903 aaPredicted RBP6.41□□□□□ -1.38
HDAC9-214ENST00000441542 MRGPRDQ8TDS7 321 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 WDR61Q9GZS3 305 aaKnown RBP6.41□□□□□ -1.38
HDAC9-214ENST00000441542 FSCN3Q9NQT6 498 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 BET1LQ9NYM9 111 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 UQCR10Q9UDW1 63 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 PTRH2Q9Y3E5 179 aaKnown RBP6.41□□□□□ -1.38
HDAC9-214ENST00000441542 CELSR3Q9NYQ7 3312 aa6.41□□□□□ -1.38
HDAC9-214ENST00000441542 TRAF3IP2O43734 574 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF253O75346 499 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 IGHMP01871 453 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 MSR1P21757 451 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 IGFBP4P22692 258 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 SRP14P37108 136 aaKnown RBP6.4□□□□□ -1.38
HDAC9-214ENST00000441542 LINC00310P59036 64 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 GNB1P62873 340 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 PSG4Q00888 419 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms