RNA–Protein interactions for RNA: ENST00000432255.6

CTCFL-208, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-208ENST00000432255 DUSP13Q9UII6 198 aa11.57□□□□□ -0.56
CTCFL-208ENST00000432255 PSG11Q9UQ72 335 aa11.57□□□□□ -0.56
CTCFL-208ENST00000432255 RIF1Q5UIP0 2472 aaKnown RBP11.56□□□□□ -0.56
CTCFL-208ENST00000432255 BTBD17A6NE02 478 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
CTCFL-208ENST00000432255 PTBP3O95758 552 aaKnown RBP11.56□□□□□ -0.56
CTCFL-208ENST00000432255 IGKV1D-33P01593 117 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 IGKV1-33P01594 117 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 PAX6P26367 422 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 MDH2P40926 338 aaKnown RBP11.56□□□□□ -0.56
CTCFL-208ENST00000432255 ZNF124Q15973 351 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 VHLLQ6RSH7 139 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 GTF3AQ92664 365 aaKnown RBP11.56□□□□□ -0.56
CTCFL-208ENST00000432255 MIOXQ9UGB7 285 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 TRBV6-6A0A0A6YYG2 114 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 SOX15O60248 233 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 BCL2P10415 239 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 ERVK11-1P61568 191 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 ADIRFQ15847 76 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 TMEM178AQ8NBL3 297 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 POM121Q96HA1 1249 aa11.56□□□□□ -0.56
CTCFL-208ENST00000432255 IGHV2-5P01817 119 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 ZNF883P0CG24 379 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 TFF3Q07654 80 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 CDPF1Q6NVV7 123 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 GSN-AS1Q9NRJ2 163 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 DOK5Q9P104 306 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 METTL1Q9UBP6 276 aaKnown RBP11.55□□□□□ -0.56
CTCFL-208ENST00000432255 SMG1Q96Q15 3661 aaKnown RBP11.55□□□□□ -0.56
CTCFL-208ENST00000432255 IGHV3OR15-7A0A075B7D8 119 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 A0A1B0GW64 132 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 TMEM30CPA0ZSE6 113 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 ODAMA1E959 279 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 COL10A1Q03692 680 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 TNFRSF9Q07011 255 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 KHDC3LQ587J8 217 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 WDR25Q64LD2 544 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-208ENST00000432255 FAM90A2PQ658T7 463 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 VKORC1L1Q8N0U8 176 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 OR13A1Q8NGR1 328 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 LSM10Q969L4 123 aaKnown RBP11.55□□□□□ -0.56
CTCFL-208ENST00000432255 GMPPAQ96IJ6 420 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-208ENST00000432255 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
CTCFL-208ENST00000432255 AURKAIP1Q9NWT8 199 aaPredicted RBP11.55□□□□□ -0.56
CTCFL-208ENST00000432255 TREM2Q9NZC2 230 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 DCHS1Q96JQ0 3298 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 SPAARA0A1B0GVQ0 90 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 ZNF737O75373 536 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 CEACAM1P13688 526 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 EIF2S3P41091 472 aaKnown RBP11.55□□□□□ -0.56
CTCFL-208ENST00000432255 GABRA6Q16445 453 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 LRRC75BQ2VPJ9 315 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 C9orf106Q8NAJ2 232 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 TAF15Q92804 592 aaKnown RBP eCLIP11.55□□□□□ -0.56
CTCFL-208ENST00000432255 COQ2Q96H96 371 aa11.55□□□□□ -0.56
CTCFL-208ENST00000432255 SMCO3A2RU48 225 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 S100A8P05109 93 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 FGF7P21781 194 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 TNFSF10P50591 281 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 ACSM6Q6P461 480 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 FAM214BQ7L5A3 538 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 RPP25LQ8N5L8 163 aaKnown RBP11.54□□□□□ -0.56
CTCFL-208ENST00000432255 OPN3Q9H1Y3 402 aaPredicted RBP11.54□□□□□ -0.56
CTCFL-208ENST00000432255 PCNX1Q96RV3 2341 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 ZNF146Q15072 292 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 MOB1BQ7L9L4 216 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 Q8IYB0 196 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 LEAP2Q969E1 77 aa11.54□□□□□ -0.56
CTCFL-208ENST00000432255 LINC00473A8K010 186 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 EGR1P18146 543 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 RTP5Q14D33 572 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 ZNF645Q8N7E2 425 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 ZNF610Q8N9Z0 462 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 OR2Z1Q8NG97 314 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 SDSLQ96GA7 329 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 MBNL3Q9NUK0 354 aaKnown RBP11.53□□□□□ -0.56
CTCFL-208ENST00000432255 SMIM6P0DI80 62 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 WT1P19544 449 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-208ENST00000432255 COL8A2P25067 703 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 TRIP6Q15654 476 aaKnown RBP11.53□□□□□ -0.56
CTCFL-208ENST00000432255 H2BFWTQ7Z2G1 175 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 C11orf53Q8IXP5 236 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 KDF1Q8NAX2 398 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-208ENST00000432255 SNIP1Q8TAD8 396 aaKnown RBP11.53□□□□□ -0.56
CTCFL-208ENST00000432255 YPEL4Q96NS1 127 aa11.53□□□□□ -0.56
CTCFL-208ENST00000432255 CECR9P0C854 216 aa11.52□□□□□ -0.56
CTCFL-208ENST00000432255 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.56
CTCFL-208ENST00000432255 FAM201AQ5SY85 155 aa11.52□□□□□ -0.56
CTCFL-208ENST00000432255 DEFB124Q8NES8 71 aa11.52□□□□□ -0.56
CTCFL-208ENST00000432255 CA5BP1Q8WTZ4 195 aa11.52□□□□□ -0.56
CTCFL-208ENST00000432255 LRRC29Q8WV35 223 aa11.52□□□□□ -0.56
CTCFL-208ENST00000432255 SMIM7Q9BQ49 75 aa11.52□□□□□ -0.56
CTCFL-208ENST00000432255 GPR61Q9BZJ8 451 aa11.52□□□□□ -0.56
CTCFL-208ENST00000432255 PLCE1Q9P212 2302 aa11.52□□□□□ -0.57
CTCFL-208ENST00000432255 IQCF6A8MYZ5 107 aa11.52□□□□□ -0.57
CTCFL-208ENST00000432255 BRWD1-AS2P59051 145 aa11.52□□□□□ -0.57
CTCFL-208ENST00000432255 GCSAMLQ5JQS6 135 aa11.52□□□□□ -0.57
CTCFL-208ENST00000432255 FFAR4Q5NUL3 377 aa11.52□□□□□ -0.57
CTCFL-208ENST00000432255 WDR82Q6UXN9 313 aa11.52□□□□□ -0.57
CTCFL-208ENST00000432255 LRP11Q86VZ4 500 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms