RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 SPAG16Q8N0X2 631 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 TMEM252Q8N6L7 170 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 YPEL2Q96QA6 119 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 FAM234AQ9H0X4 552 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 ARV1Q9H2C2 271 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 PLA2G2EQ9NZK7 142 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 NKX6-3A6NJ46 265 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 ZNF705EA8MWA4 302 aaPredicted RBP16.2■□□□□ 0.18
VRK2-205ENST00000432057 EIF5AL1Q6IS14 154 aaKnown RBP16.2■□□□□ 0.18
VRK2-205ENST00000432057 ZNF66Q6ZN08 573 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 EIF4E3Q8N5X7 224 aaKnown RBP16.2■□□□□ 0.18
VRK2-205ENST00000432057 SLC25A31Q9H0C2 315 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 LPAR3Q9UBY5 353 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 COL6A6A6NMZ7 2263 aa16.2■□□□□ 0.18
VRK2-205ENST00000432057 TRGV10A0A0A0MS01 117 aa16.19■□□□□ 0.18
VRK2-205ENST00000432057 SIAH2O43255 324 aa16.19■□□□□ 0.18
VRK2-205ENST00000432057 ZP3P21754 424 aa16.19■□□□□ 0.18
VRK2-205ENST00000432057 G6PCP35575 357 aa16.19■□□□□ 0.18
VRK2-205ENST00000432057 CCDC28AQ8IWP9 274 aa16.19■□□□□ 0.18
VRK2-205ENST00000432057 LEAP2Q969E1 77 aa16.19■□□□□ 0.18
VRK2-205ENST00000432057 TAS2R3Q9NYW6 316 aa16.19■□□□□ 0.18
VRK2-205ENST00000432057 MMP24Q9Y5R2 645 aa16.19■□□□□ 0.18
VRK2-205ENST00000432057 NBASA2RRP1 2371 aa16.19■□□□□ 0.18
VRK2-205ENST00000432057 H3BP45 60 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 TMEM178BH3BS89 294 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 TMPRSS2O15393 492 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 SLC31A2O15432 143 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 CLDN14O95500 239 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 SFTPCP11686 197 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 APOBEC3AP31941 199 aaPredicted RBP16.18■□□□□ 0.18
VRK2-205ENST00000432057 ZNF134P52741 427 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 CLINT1Q14677 625 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 MST1LQ2TV78 715 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 HSD17B10Q99714 261 aaKnown RBP16.18■□□□□ 0.18
VRK2-205ENST00000432057 GINS3Q9BRX5 216 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 TRAV38-1A0A0B4J264 116 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 KBTBD11-OT1A0A1B0GTJ5 212 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 PROP1O75360 226 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 CST7O76096 145 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 KRASP01116 189 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 IAPPP10997 89 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 SULT1A2P50226 295 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 SWI5Q1ZZU3 235 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 C1orf87Q8N0U7 546 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 CCL17Q92583 94 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 IFI27L2Q9H2X8 130 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 TMEM106BQ9NUM4 274 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 GFOD1Q9NXC2 390 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 CLN8Q9UBY8 286 aa16.18■□□□□ 0.18
VRK2-205ENST00000432057 ANKHD1Q8IWZ3 2542 aaKnown RBP16.18■□□□□ 0.18
VRK2-205ENST00000432057 PPIAL4EA0A075B759 164 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 PPIAL4DF5H284 164 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 MED6O75586 246 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 P0C879 139 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 PPIAL4FP0DN26 164 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 NDUFB7P17568 137 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 DYNLT3P51808 116 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 EFNB3Q15768 340 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 RPL39P5Q59GN2 51 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 TCTEX1D1Q8N7M0 179 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 PPIAL4AQ9Y536 164 aa16.17■□□□□ 0.18
VRK2-205ENST00000432057 A0A1W2PPE3 182 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 SHOXO15266 292 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 SYNGR2O43760 224 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 DUTP33316 252 aaKnown RBP16.16■□□□□ 0.18
VRK2-205ENST00000432057 NCR3LG1Q68D85 454 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 HSD17B11Q8NBQ5 300 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 OR5C1Q8NGR4 320 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 CA5BP1Q8WTZ4 195 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 FAM216AQ8WUB2 273 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 SMIM8Q96KF7 97 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 RAB40CQ96S21 281 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 SH3BGRL3Q9H299 93 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 RAB9BQ9NP90 201 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 KCNJ16Q9NPI9 418 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 FAM212BQ9NTI7 297 aaPredicted RBP16.16■□□□□ 0.18
VRK2-205ENST00000432057 CISD1Q9NZ45 108 aaKnown RBP16.16■□□□□ 0.18
VRK2-205ENST00000432057 RELNP78509 3460 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 B9A039 149 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 M0R1X1 148 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 RPL23AP62750 156 aaKnown RBP16.16■□□□□ 0.18
VRK2-205ENST00000432057 TMEM267Q0VDI3 215 aaPredicted RBP16.16■□□□□ 0.18
VRK2-205ENST00000432057 TMEM217Q8N7C4 229 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 ABHD14AQ9BUJ0 271 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 MS4A5Q9H3V2 200 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 IDI2-AS1Q9NZ38 188 aa16.16■□□□□ 0.18
VRK2-205ENST00000432057 SLC25A10Q9UBX3 287 aaPredicted RBP16.16■□□□□ 0.18
VRK2-205ENST00000432057 ZNF729A6NN14 1252 aaPredicted RBP16.15■□□□□ 0.18
VRK2-205ENST00000432057 FCN3O75636 299 aa16.15■□□□□ 0.18
VRK2-205ENST00000432057 NFYBP25208 207 aa16.15■□□□□ 0.18
VRK2-205ENST00000432057 BAXQ07812 192 aa16.15■□□□□ 0.18
VRK2-205ENST00000432057 PXDC1Q5TGL8 231 aa16.15■□□□□ 0.18
VRK2-205ENST00000432057 MARC2Q969Z3 335 aa16.15■□□□□ 0.18
VRK2-205ENST00000432057 SAT2Q96F10 170 aaPredicted RBP16.15■□□□□ 0.18
VRK2-205ENST00000432057 COA4Q9NYJ1 87 aa16.15■□□□□ 0.18
VRK2-205ENST00000432057 TOR1AO14656 332 aa16.14■□□□□ 0.17
VRK2-205ENST00000432057 TXNL1O43396 289 aa16.14■□□□□ 0.17
VRK2-205ENST00000432057 MMP23AO75900 390 aa16.14■□□□□ 0.17
VRK2-205ENST00000432057 SPP1P10451 314 aa16.14■□□□□ 0.17
VRK2-205ENST00000432057 MIDNQ504T8 468 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms