RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 WNT2P09544 360 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 ZNF134P52741 427 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 NHLH2Q02577 135 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 EIF4EBP1Q13541 118 aaPredicted RBP13.81□□□□□ -0.2
USHBP1-203ENST00000431146 C17orf58Q2M2W7 97 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 CR1LQ2VPA4 569 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 PDZD9Q8IXQ8 264 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 CLEC18CQ8NCF0 446 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 PLEKHA2Q9HB19 425 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 PFDN2Q9UHV9 154 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 A0A1W2PPE3 182 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 LINC00473A8K010 186 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 C17orf98A8MV24 154 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 SIGLEC5O15389 551 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 CLDN14O95500 239 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 NDUFB7P17568 137 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 LPAR6P43657 344 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 UQCRFS1P47985 274 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 BRWD1-AS2P59051 145 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 AANATQ16613 207 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 TCTEX1D2Q8WW35 142 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 PHYHIPLQ96FC7 376 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 TMEM106BQ9NUM4 274 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 CACNG5Q9UF02 275 aa13.81□□□□□ -0.2
USHBP1-203ENST00000431146 TRAV20A0A0B4J274 112 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 FAM24AA6NFZ4 105 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 RNF212BA8MTL3 300 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 LINC00587B1AMM8 73 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 CGB3P0DN86 165 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 CGB7P0DN87 165 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 P2RY1P47900 373 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 CAV2P51636 162 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 SLC25A32Q9H2D1 315 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 MS4A5Q9H3V2 200 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 C11orf1Q9H5F2 150 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 ZFP57Q9NU63 452 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 COA4Q9NYJ1 87 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 JPT1Q9UK76 154 aa13.8□□□□□ -0.2
USHBP1-203ENST00000431146 PPIAL4EA0A075B759 164 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 TRGV10A0A0A0MS01 117 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 TRAV38-1A0A0B4J264 116 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 PPIAL4DF5H284 164 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 LGALS8O00214 317 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 F2RL2O00254 374 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 SLC31A2O15432 143 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 FCN3O75636 299 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 TMEM50AO95807 157 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 CLDN1O95832 211 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 PPIAL4FP0DN26 164 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 ERVFRD-1P60508 538 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 ID3Q02535 119 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 TFF3Q07654 80 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 ZBTB34Q8NCN2 500 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 WFDC1Q9HC57 220 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 PPIAL4AQ9Y536 164 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 CFAP46Q8IYW2 2715 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 B9A039 149 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 GPR137BO60478 399 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 PROP1O75360 226 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 NFYBP25208 207 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 GPR12P47775 334 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 EFNB3Q15768 340 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 LYPD2Q6UXB3 125 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 SPAG16Q8N0X2 631 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 MUC15Q8N387 334 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 SVIPQ8NHG7 77 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 FAM234AQ9H0X4 552 aa13.79□□□□□ -0.2
USHBP1-203ENST00000431146 KBTBD11-OT1A0A1B0GTJ5 212 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 A0A1B0GU03 582 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 IGSF23A1L1A6 192 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 NKX6-3A6NJ46 265 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 LYNX1G3V0Z9 82 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 TAAR5O14804 337 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 CHST1O43916 411 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 YPEL1O60688 119 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 PITX3O75364 302 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 MMP23AO75900 390 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 S1PR2O95136 353 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 KRASP01116 189 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 LYNX1P0DP58 116 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 ZP3P21754 424 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 G6PCP35575 357 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 MEOX2P50222 304 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 RPL39P5Q59GN2 51 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 C1orf87Q8N0U7 546 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 OR2C3Q8N628 320 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 EDARADDQ8WWZ3 215 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 LRRC46Q96FV0 321 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 YPEL2Q96QA6 119 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 REG4Q9BYZ8 158 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 SLC25A10Q9UBX3 287 aaPredicted RBP13.78□□□□□ -0.2
USHBP1-203ENST00000431146 CLN8Q9UBY8 286 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 IGSF10Q6WRI0 2623 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 WRBO00258 174 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 CATR1Q13166 79 aa13.78□□□□□ -0.2
USHBP1-203ENST00000431146 ZNF672Q499Z4 452 aaPredicted RBP13.78□□□□□ -0.2
USHBP1-203ENST00000431146 LSM10Q969L4 123 aaKnown RBP13.78□□□□□ -0.2
USHBP1-203ENST00000431146 DOCK11Q5JSL3 2073 aa13.77□□□□□ -0.2
USHBP1-203ENST00000431146 IGHV1-69-2A0A0G2JMI3 117 aa13.77□□□□□ -0.21
USHBP1-203ENST00000431146 FBXO24O75426 580 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms