RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SAA2-SAA4A0A096LPE2 208 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 FSTL3O95633 263 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 IGKV1-5P01602 117 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 SAA2P0DJI9 122 aaPredicted RBP18.12■□□□□ 0.49
VSX1-205ENST00000429762 EFNA4P52798 201 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 CATR1Q13166 79 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 PRSS54Q6PEW0 395 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 TMEM65Q6PI78 240 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 HEPN1Q6WQI6 88 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 ODF3L1Q8IXM7 274 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 SPAG16Q8N0X2 631 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 IL22RA2Q969J5 263 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 NEIL1Q96FI4 390 aaPredicted RBP18.12■□□□□ 0.49
VSX1-205ENST00000429762 LPAR3Q9UBY5 353 aa18.12■□□□□ 0.49
VSX1-205ENST00000429762 KMT2BQ9UMN6 2715 aaPredicted RBP18.12■□□□□ 0.49
VSX1-205ENST00000429762 S1PR2O95136 353 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 GPR6P46095 362 aaPredicted RBP18.11■□□□□ 0.49
VSX1-205ENST00000429762 MSMO1Q15800 293 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 WDR25Q64LD2 544 aaPredicted RBP18.11■□□□□ 0.49
VSX1-205ENST00000429762 ZNF525Q8N782 197 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 OR4D5Q8NGN0 318 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 MIOXQ9UGB7 285 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 MALRD1Q5VYJ5 2156 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 MSGN1A6NI15 193 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 K7EPK0 472 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 OVOL3O00110 214 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 B3GALNT1O75752 331 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 VDAC1P21796 283 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 DUTP33316 252 aaKnown RBP18.11■□□□□ 0.49
VSX1-205ENST00000429762 RAB7AP51149 207 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 FAM71E2Q8N5Q1 922 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 GON7Q9BXV9 100 aa18.11■□□□□ 0.49
VSX1-205ENST00000429762 S100A11P31949 105 aa18.1■□□□□ 0.49
VSX1-205ENST00000429762 AKR1C2P52895 323 aa18.1■□□□□ 0.49
VSX1-205ENST00000429762 ZNF66Q6ZN08 573 aa18.1■□□□□ 0.49
VSX1-205ENST00000429762 HSD17B10Q99714 261 aaKnown RBP18.1■□□□□ 0.49
VSX1-205ENST00000429762 DUXBA0A1W2PPF3 345 aa18.1■□□□□ 0.49
VSX1-205ENST00000429762 ITGB1BP1O14713 200 aa18.1■□□□□ 0.49
VSX1-205ENST00000429762 TMEM33P57088 247 aa18.1■□□□□ 0.49
VSX1-205ENST00000429762 CXorf66Q5JRM2 361 aaPredicted RBP18.1■□□□□ 0.49
VSX1-205ENST00000429762 THOC7Q6I9Y2 204 aaKnown RBP18.1■□□□□ 0.49
VSX1-205ENST00000429762 Q6ZRM9 215 aa18.1■□□□□ 0.49
VSX1-205ENST00000429762 OR8H1Q8NGG4 311 aa18.1■□□□□ 0.49
VSX1-205ENST00000429762 CCL19Q99731 98 aa18.1■□□□□ 0.49
VSX1-205ENST00000429762 MAGT1Q9H0U3 335 aa18.1■□□□□ 0.49
VSX1-205ENST00000429762 TRBV23-1A0A0A0MS06 115 aa18.09■□□□□ 0.49
VSX1-205ENST00000429762 C22orf46C9J442 243 aa18.09■□□□□ 0.49
VSX1-205ENST00000429762 RGS13O14921 159 aa18.09■□□□□ 0.49
VSX1-205ENST00000429762 IGHV4-39P01824 125 aa18.09■□□□□ 0.49
VSX1-205ENST00000429762 G6PCP35575 357 aa18.09■□□□□ 0.49
VSX1-205ENST00000429762 SLC25A48Q6ZT89 311 aaKnown RBP18.09■□□□□ 0.49
VSX1-205ENST00000429762 C11orf42Q8N5U0 333 aa18.09■□□□□ 0.49
VSX1-205ENST00000429762 ZNF251Q9BRH9 671 aa18.09■□□□□ 0.49
VSX1-205ENST00000429762 RCL1Q9Y2P8 373 aaKnown RBP18.09■□□□□ 0.49
VSX1-205ENST00000429762 ARHGAP32A7KAX9 2087 aa18.08■□□□□ 0.49
VSX1-205ENST00000429762 FCGR3BO75015 233 aa18.08■□□□□ 0.49
VSX1-205ENST00000429762 DEDDO75618 318 aa18.08■□□□□ 0.49
VSX1-205ENST00000429762 LYL1P12980 280 aa18.08■□□□□ 0.49
VSX1-205ENST00000429762 TMEM30BQ3MIR4 351 aa18.08■□□□□ 0.49
VSX1-205ENST00000429762 ACOT7LQ6ZUV0 252 aa18.08■□□□□ 0.49
VSX1-205ENST00000429762 INO80EQ8NBZ0 244 aaPredicted RBP18.08■□□□□ 0.49
VSX1-205ENST00000429762 OR10A7Q8NGE5 316 aa18.08■□□□□ 0.49
VSX1-205ENST00000429762 NRGNQ92686 78 aa18.08■□□□□ 0.49
VSX1-205ENST00000429762 PATZ1Q9HBE1 687 aaKnown RBP18.08■□□□□ 0.49
VSX1-205ENST00000429762 CFDP00746 253 aaPredicted RBP18.08■□□□□ 0.48
VSX1-205ENST00000429762 KRASP01116 189 aa18.08■□□□□ 0.48
VSX1-205ENST00000429762 GNB2P62879 340 aa18.08■□□□□ 0.48
VSX1-205ENST00000429762 KCNRGQ8N5I3 272 aa18.08■□□□□ 0.48
VSX1-205ENST00000429762 SPIN2AQ99865 258 aa18.08■□□□□ 0.48
VSX1-205ENST00000429762 SPIN2BQ9BPZ2 258 aa18.08■□□□□ 0.48
VSX1-205ENST00000429762 CACNG5Q9UF02 275 aa18.08■□□□□ 0.48
VSX1-205ENST00000429762 PPIAL4CA0A0B4J2A2 164 aa18.07■□□□□ 0.48
VSX1-205ENST00000429762 RAB29O14966 203 aa18.07■□□□□ 0.48
VSX1-205ENST00000429762 GOSR1O95249 250 aa18.07■□□□□ 0.48
VSX1-205ENST00000429762 PET100P0DJ07 73 aa18.07■□□□□ 0.48
VSX1-205ENST00000429762 PPIAL4GP0DN37 164 aa18.07■□□□□ 0.48
VSX1-205ENST00000429762 IGHV1-8P0DP01 117 aa18.07■□□□□ 0.48
VSX1-205ENST00000429762 POLR2GP62487 172 aaKnown RBP eCLIP18.07■□□□□ 0.48
VSX1-205ENST00000429762 SMCO1Q147U7 214 aa18.07■□□□□ 0.48
VSX1-205ENST00000429762 SP5Q6BEB4 398 aaPredicted RBP18.07■□□□□ 0.48
VSX1-205ENST00000429762 IGFBPL1Q8WX77 278 aa18.07■□□□□ 0.48
VSX1-205ENST00000429762 COX6B1P14854 86 aa18.06■□□□□ 0.48
VSX1-205ENST00000429762 COL8A1P27658 744 aa18.06■□□□□ 0.48
VSX1-205ENST00000429762 FAM208BQ5VWN6 2430 aa18.06■□□□□ 0.48
VSX1-205ENST00000429762 OR2F2O95006 317 aa18.06■□□□□ 0.48
VSX1-205ENST00000429762 NKX2-1P43699 371 aaPredicted RBP18.06■□□□□ 0.48
VSX1-205ENST00000429762 OR2F1Q13607 317 aa18.06■□□□□ 0.48
VSX1-205ENST00000429762 FAM216AQ8WUB2 273 aa18.06■□□□□ 0.48
VSX1-205ENST00000429762 ONECUT1Q9UBC0 465 aa18.06■□□□□ 0.48
VSX1-205ENST00000429762 POMT1Q9Y6A1 747 aa18.06■□□□□ 0.48
VSX1-205ENST00000429762 CHD6Q8TD26 2715 aa18.05■□□□□ 0.48
VSX1-205ENST00000429762 CLEC18AA5D8T8 446 aa18.05■□□□□ 0.48
VSX1-205ENST00000429762 F5H0A9 414 aaPredicted RBP18.05■□□□□ 0.48
VSX1-205ENST00000429762 ST8SIA3O43173 380 aa18.05■□□□□ 0.48
VSX1-205ENST00000429762 SSSCA1O60232 199 aa18.05■□□□□ 0.48
VSX1-205ENST00000429762 RLN2P04090 185 aa18.05■□□□□ 0.48
VSX1-205ENST00000429762 CLEC9AQ6UXN8 241 aa18.05■□□□□ 0.48
VSX1-205ENST00000429762 CLEC18CQ8NCF0 446 aa18.05■□□□□ 0.48
VSX1-205ENST00000429762 LSM10Q969L4 123 aaKnown RBP18.05■□□□□ 0.48
VSX1-205ENST00000429762 SSBP3Q9BWW4 388 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms