RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 TCAPO15273 167 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 GALR2O43603 387 aaPredicted RBP10.78□□□□□ -0.68
CPNE4-201ENST00000429747 FOLR2P14207 255 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 FOSL1P15407 271 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 RAB4AP20338 218 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 AGAP20933 346 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 CRYGSP22914 178 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 RHOBP62745 196 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 RTP5Q14D33 572 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 ACSM6Q6P461 480 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 HEPN1Q6WQI6 88 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 P2RX4Q99571 388 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 CLCF1Q9UBD9 225 aa10.78□□□□□ -0.68
CPNE4-201ENST00000429747 CEACAM18A8MTB9 384 aa10.77□□□□□ -0.68
CPNE4-201ENST00000429747 UBE2G1P62253 170 aa10.77□□□□□ -0.68
CPNE4-201ENST00000429747 OR4P4Q8NGL7 312 aa10.77□□□□□ -0.68
CPNE4-201ENST00000429747 HSD17B10Q99714 261 aaKnown RBP10.77□□□□□ -0.68
CPNE4-201ENST00000429747 CXXC4Q9H2H0 198 aa10.77□□□□□ -0.68
CPNE4-201ENST00000429747 DYNLRB1Q9NP97 96 aa10.77□□□□□ -0.68
CPNE4-201ENST00000429747 IL36GQ9NZH8 169 aa10.77□□□□□ -0.68
CPNE4-201ENST00000429747 ZNF407Q9C0G0 2248 aa10.77□□□□□ -0.68
CPNE4-201ENST00000429747 A0A1B0GV90 55 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 PMS2P1A4D2B8 440 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 CCKARP32238 428 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 SUMO1P63165 101 aaKnown RBP10.77□□□□□ -0.69
CPNE4-201ENST00000429747 RTL8BQ17RB0 113 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 PPP1R32Q7Z5V6 425 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 SAXO1Q8IYX7 474 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 LRTM2Q8N967 370 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
CPNE4-201ENST00000429747 WDR61Q9GZS3 305 aaKnown RBP10.77□□□□□ -0.69
CPNE4-201ENST00000429747 RIF1Q5UIP0 2472 aaKnown RBP10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST1H2BKO60814 126 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST1H2BJP06899 126 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 CXCL1P09341 107 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST1H2BOP23527 126 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 CD1BP29016 333 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST1H2BBP33778 126 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 GNG4P50150 75 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 CNN1P51911 297 aaKnown RBP10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST1H2BDP58876 126 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST1H2BCP62807 126 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST2H2BEQ16778 126 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST1H2BHQ93079 126 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST1H2BNQ99877 126 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 HIST1H2BMQ99879 126 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 TRAV34A0A0B4J273 112 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 S1PR2O95136 353 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 ID3Q02535 119 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 ELOBQ15370 118 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 GFI1BQ5VTD9 330 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 OR8G5Q8NG78 346 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 OR5B3Q8NH48 314 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 TMEM171Q8WVE6 324 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 TPPP3Q9BW30 176 aa10.77□□□□□ -0.69
CPNE4-201ENST00000429747 TRGV10A0A0A0MS01 117 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 M0R143 59 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 AMTP48728 403 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 ZBTB34Q8NCN2 500 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 WBP1Q96G27 269 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 POM121L2Q96KW2 1035 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 C1QTNF5Q9BXJ0 243 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 FOXD3Q9UJU5 478 aaPredicted RBP10.76□□□□□ -0.69
CPNE4-201ENST00000429747 APC2O95996 2303 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 ZNF729A6NN14 1252 aaPredicted RBP10.76□□□□□ -0.69
CPNE4-201ENST00000429747 HSBP1O75506 76 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 OR10J4P0C629 311 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 SOX8P57073 446 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 STARD6P59095 220 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 LSM10Q969L4 123 aaKnown RBP10.76□□□□□ -0.69
CPNE4-201ENST00000429747 KBTBD11O94819 623 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 LINC00469Q8N7U9 141 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 OR5P3Q8WZ94 311 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 PAM16Q9Y3D7 125 aa10.76□□□□□ -0.69
CPNE4-201ENST00000429747 PDE6DO43924 150 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 IER3P46695 156 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 CD81P60033 236 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 ERHP84090 104 aaKnown RBP10.75□□□□□ -0.69
CPNE4-201ENST00000429747 PSG5Q15238 335 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 SH2D2AQ9NP31 389 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 ZNF716A6NP11 495 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 HOXB1P14653 301 aaPredicted RBP10.75□□□□□ -0.69
CPNE4-201ENST00000429747 PSMG3Q9BT73 122 aaPredicted RBP10.75□□□□□ -0.69
CPNE4-201ENST00000429747 LIME1Q9H400 295 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 PILRBQ9UKJ0 227 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 FER1L5A0AVI2 2057 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 A0A087WWC5 75 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 NKX6-3A6NJ46 265 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 SP1P08047 785 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 FOXG1P55316 489 aaPredicted RBP10.75□□□□□ -0.69
CPNE4-201ENST00000429747 SLC35B1P78383 322 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 SPEM2Q0P670 501 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 C1orf210Q8IVY1 113 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 ZNF525Q8N782 197 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 TBX15Q96SF7 602 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 PKIBQ9C010 78 aa10.75□□□□□ -0.69
CPNE4-201ENST00000429747 ERVFRD-1P60508 538 aa10.74□□□□□ -0.69
CPNE4-201ENST00000429747 COL10A1Q03692 680 aa10.74□□□□□ -0.69
CPNE4-201ENST00000429747 HGFACQ04756 655 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms