RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 ZNF645Q8N7E2 425 aa11.2□□□□□ -0.62
SNRNP200-202ENST00000429650 OR1L1Q8NH94 360 aa11.2□□□□□ -0.62
SNRNP200-202ENST00000429650 TAF15Q92804 592 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNRNP200-202ENST00000429650 PINX1Q96BK5 328 aaKnown RBP11.2□□□□□ -0.62
SNRNP200-202ENST00000429650 DOK5Q9P104 306 aa11.2□□□□□ -0.62
SNRNP200-202ENST00000429650 USF3Q68DE3 2245 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 UBE2L5PA0A1B0GUS4 154 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 IFITM10A6NMD0 228 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 CYB5BO43169 146 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 RAMP3O60896 148 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 CDX1P47902 265 aaPredicted RBP11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 ELLP55199 621 aaPredicted RBP11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 NDUFA6P56556 154 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 C5orf30Q96GV9 206 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 GMPPAQ96IJ6 420 aaPredicted RBP11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 P2RX4Q99571 388 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 TOLLIPQ9H0E2 274 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 RBKSQ9H477 322 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 HES4Q9HCC6 221 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 TMEM30CPA0ZSE6 113 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 MAP1LC3B2A6NCE7 125 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 TNFSF15O95150 251 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 CLDN1O95832 211 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 OR3A1P47881 315 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 OR8G2PQ6IF36 304 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 MRGPRGQ86SM5 289 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 MAP1LC3BQ9GZQ8 125 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 OR2D2Q9H210 308 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 ZDHHC11Q9H8X9 412 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 KCNIP1Q9NZI2 227 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 HSPB7Q9UBY9 170 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 VAX2Q9UIW0 290 aa11.19□□□□□ -0.62
SNRNP200-202ENST00000429650 TMEM210A6NLX4 147 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 C12orf77C9JDV5 145 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST1H2BKO60814 126 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 LYZL6O75951 148 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST1H2BJP06899 126 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST1H2BOP23527 126 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST1H2BBP33778 126 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST1H2BDP58876 126 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST1H2BCP62807 126 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 RPL30P62888 115 aaKnown RBP11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 TGFBR3Q03167 851 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST2H2BEQ16778 126 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 FAM53AQ6NSI3 398 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 FAM180AQ6UWF9 173 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 DHRS13Q6UX07 377 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 DMRTC2Q8IXT2 367 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 ZBTB34Q8NCN2 500 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST1H2BHQ93079 126 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 GALMQ96C23 342 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST1H2BNQ99877 126 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 HIST1H2BMQ99879 126 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 SDF2L1Q9HCN8 221 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 TMEM242Q9NWH2 141 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 CEBPZOSA8MTT3 80 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 CDX4O14627 284 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 CYB5R3P00387 301 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 P0C879 139 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 S100PP25815 95 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 G6PCP35575 357 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 MPV17P39210 176 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 RND2P52198 227 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 ARG2P78540 354 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 EIF4EBP1Q13541 118 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 OR2B11Q5JQS5 317 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 GGACTQ9BVM4 153 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 CACNA1DQ01668 2161 aa11.18□□□□□ -0.62
SNRNP200-202ENST00000429650 A8MXE2 369 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 C1QTNF9BB2RNN3 333 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 WNT9BO14905 357 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 KRASP01116 189 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 IGKV1D-33P01593 117 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 IGKV1-33P01594 117 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 TRGC2P03986 189 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 ZNF816Q0VGE8 651 aaPredicted RBP11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 SPNS3Q6ZMD2 512 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 GCNT2Q8N0V5 402 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 ZNF808Q8N4W9 903 aaPredicted RBP11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 RPP25LQ8N5L8 163 aaKnown RBP11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 OR52L2PQ8NGH6 319 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 OR13D1Q8NGV5 346 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 TIMM9Q9Y5J7 89 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 CNOT1A5YKK6 2376 aaKnown RBP11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 SVILO95425 2214 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 B9A039 149 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 CLDN34H7C241 214 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 MLNRO43193 412 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 SLC25A17O43808 307 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 IFNA1P01562 189 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 IL2RGP31785 369 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 HOXA4Q00056 320 aaPredicted RBP11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 PMP22Q01453 160 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 MSMO1Q15800 293 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 ZNF826PQ6ZT77 177 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 TMPRSS7Q7RTY8 843 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 CXorf67Q86X51 503 aaPredicted RBP11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 C1orf87Q8N0U7 546 aa11.17□□□□□ -0.62
SNRNP200-202ENST00000429650 KLF14Q8TD94 323 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms