RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 OR5AN1Q8NGI8 311 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 SETD6Q8TBK2 473 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 PGLYRP3Q96LB9 341 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 RNF5Q99942 180 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 FAM110AQ9BQ89 295 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 FAAP24Q9BTP7 215 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 C9orf16Q9BUW7 83 aa13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 CHMP1AQ9HD42 196 aaPredicted RBP13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 EXOSC1Q9Y3B2 195 aaKnown RBP13.95□□□□□ -0.18
UPK3BP1-201ENST00000428678 H3BUA1 57 aa13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 CPEP16870 476 aa13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 RPS16P62249 146 aaKnown RBP13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 MOGAT2Q3SYC2 334 aa13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 ZFP1Q6P2D0 407 aa13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 DRAXINQ8NBI3 349 aaPredicted RBP13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 TSNAXQ99598 290 aaKnown RBP13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 SLC29A1Q99808 456 aa13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 THAP7Q9BT49 309 aaPredicted RBP13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 DIMT1Q9UNQ2 313 aaKnown RBP13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 CEPT1Q9Y6K0 416 aa13.94□□□□□ -0.18
UPK3BP1-201ENST00000428678 IRGMA1A4Y4 181 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 SPDEFO95238 335 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 CNIH1O95406 144 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 IGKV1-16P04430 117 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 DEFA5Q01523 94 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 C6orf201Q7Z4U5 140 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 Q8N402 240 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 SVOPQ8N4V2 548 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 NKAIN3Q8N8D7 197 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 DERL3Q96Q80 235 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 UQCC2Q9BRT2 126 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 HIPK2Q9H2X6 1198 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 GHRLQ9UBU3 117 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 ADAM30Q9UKF2 790 aa13.93□□□□□ -0.18
UPK3BP1-201ENST00000428678 IZUMO1RA6ND01 250 aa13.92□□□□□ -0.18
UPK3BP1-201ENST00000428678 SLC25A17O43808 307 aa13.92□□□□□ -0.18
UPK3BP1-201ENST00000428678 MED21Q13503 144 aa13.92□□□□□ -0.18
UPK3BP1-201ENST00000428678 OR10K2Q6IF99 312 aa13.92□□□□□ -0.18
UPK3BP1-201ENST00000428678 PLEKHA3Q9HB20 300 aa13.92□□□□□ -0.18
UPK3BP1-201ENST00000428678 SHISA3A0PJX4 238 aa13.91□□□□□ -0.18
UPK3BP1-201ENST00000428678 CSN3P07498 182 aa13.91□□□□□ -0.18
UPK3BP1-201ENST00000428678 TATDN3Q17R31 274 aa13.91□□□□□ -0.18
UPK3BP1-201ENST00000428678 MOB1BQ7L9L4 216 aa13.91□□□□□ -0.18
UPK3BP1-201ENST00000428678 EDARADDQ8WWZ3 215 aa13.91□□□□□ -0.18
UPK3BP1-201ENST00000428678 AGMATQ9BSE5 352 aa13.91□□□□□ -0.18
UPK3BP1-201ENST00000428678 C11orf54Q9H0W9 315 aaPredicted RBP13.91□□□□□ -0.18
UPK3BP1-201ENST00000428678 OR1A1Q9P1Q5 309 aa13.91□□□□□ -0.18
UPK3BP1-201ENST00000428678 PEF1Q9UBV8 284 aaKnown RBP13.91□□□□□ -0.18
UPK3BP1-201ENST00000428678 DYNC1I1O14576 645 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 ITGB1BP1O14713 200 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 NAPSAO96009 420 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 TRBV12-3P01733 135 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 APOA2P02652 100 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 AADACP22760 399 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 CEACAM6P40199 344 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 LINC00205P59089 165 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 CD81P60033 236 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 RPS27AP62979 156 aaKnown RBP13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 RPEL1Q2QD12 228 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 ZNF880Q6PDB4 577 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 ZNF383Q8NA42 475 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 ZNF555Q8NEP9 628 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 TMEM80Q96HE8 168 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 TMEM59Q9BXS4 323 aa13.9□□□□□ -0.18
UPK3BP1-201ENST00000428678 TPPPO94811 219 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 UBBP0CG47 229 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 ZBTB25P24278 435 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 HTR2CP28335 458 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 TAS2R43P59537 309 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 PJVKQ0ZLH3 352 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 ZNF343Q6P1L6 599 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 PDPNQ86YL7 162 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 ZNF485Q8NCK3 441 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 BVESQ8NE79 360 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 TINAGL1Q9GZM7 467 aaPredicted RBP13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 COA4Q9NYJ1 87 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 SIGLEC8Q9NYZ4 499 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 ZNF221Q9UK13 617 aa13.89□□□□□ -0.19
UPK3BP1-201ENST00000428678 PROP1O75360 226 aa13.88□□□□□ -0.19
UPK3BP1-201ENST00000428678 MAPK3P27361 379 aaPredicted RBP13.88□□□□□ -0.19
UPK3BP1-201ENST00000428678 LGALS7P47929 136 aa13.88□□□□□ -0.19
UPK3BP1-201ENST00000428678 SSBP2P81877 361 aaPredicted RBP13.88□□□□□ -0.19
UPK3BP1-201ENST00000428678 LINC00322Q6ZN03 302 aaPredicted RBP13.88□□□□□ -0.19
UPK3BP1-201ENST00000428678 NEURL2Q9BR09 285 aa13.88□□□□□ -0.19
UPK3BP1-201ENST00000428678 NICN1Q9BSH3 213 aa13.88□□□□□ -0.19
UPK3BP1-201ENST00000428678 KRTAP17-1Q9BYP8 105 aa13.88□□□□□ -0.19
UPK3BP1-201ENST00000428678 KCNK15Q9H427 330 aa13.88□□□□□ -0.19
UPK3BP1-201ENST00000428678 PLEKHJ1Q9NW61 149 aa13.88□□□□□ -0.19
UPK3BP1-201ENST00000428678 OR2A4O95047 310 aa13.87□□□□□ -0.19
UPK3BP1-201ENST00000428678 CELP19835 753 aa13.87□□□□□ -0.19
UPK3BP1-201ENST00000428678 HLA-DRB3P79483 266 aa13.87□□□□□ -0.19
UPK3BP1-201ENST00000428678 DYRK1AQ13627 763 aa13.87□□□□□ -0.19
UPK3BP1-201ENST00000428678 OR2K2Q8NGT1 345 aa13.87□□□□□ -0.19
UPK3BP1-201ENST00000428678 THRSPQ92748 146 aa13.87□□□□□ -0.19
UPK3BP1-201ENST00000428678 HDHD3Q9BSH5 251 aaPredicted RBP13.87□□□□□ -0.19
UPK3BP1-201ENST00000428678 SLC35D1Q9NTN3 355 aa13.87□□□□□ -0.19
UPK3BP1-201ENST00000428678 PEMTQ9UBM1 199 aa13.87□□□□□ -0.19
UPK3BP1-201ENST00000428678 FRAS1Q86XX4 4008 aa13.87□□□□□ -0.19
UPK3BP1-201ENST00000428678 A0A0B4J203 849 aa13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 M0R1X1 148 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms