RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 FHITP49789 147 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 SULT1A2P50226 295 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 DYNLT3P51808 116 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 SRSF3P84103 164 aaKnown RBP8.63□□□□□ -1.03
HDAC9-210ENST00000428307 MST1LQ2TV78 715 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 NCMAPQ5T1S8 102 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 DMRTC2Q8IXT2 367 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-210ENST00000428307 KDF1Q8NAX2 398 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-210ENST00000428307 EDARADDQ8WWZ3 215 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 RNASE6Q93091 150 aaKnown RBP8.63□□□□□ -1.03
HDAC9-210ENST00000428307 SMIM8Q96KF7 97 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 ZNF665Q9H7R5 613 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 SEBOXQ9HB31 216 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-210ENST00000428307 TMA7Q9Y2S6 64 aaKnown RBP8.63□□□□□ -1.03
HDAC9-210ENST00000428307 DSCAMO60469 2012 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 ABCA4P78363 2273 aa8.63□□□□□ -1.03
HDAC9-210ENST00000428307 ANKHD1Q8IWZ3 2542 aaKnown RBP8.62□□□□□ -1.03
HDAC9-210ENST00000428307 SYNGR2O43760 224 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 APOC3P02656 99 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 MUC1P15941 1255 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-210ENST00000428307 NDUFB7P17568 137 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 NFYBP25208 207 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 ERVFRD-1P60508 538 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 C17orf58Q2M2W7 97 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 CR1LQ2VPA4 569 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 RPL39P5Q59GN2 51 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 NCR3LG1Q68D85 454 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 ZNF788Q6ZQV5 615 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 SSX8Q7RTT4 187 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 ZNF295-AS1Q8N0V1 137 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-210ENST00000428307 ST6GALNAC3Q8NDV1 305 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 MS4A7Q9GZW8 240 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-210ENST00000428307 TMEM231Q9H6L2 316 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 DYNLRB1Q9NP97 96 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 KCNJ16Q9NPI9 418 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 JPT1Q9UK76 154 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 ITPR1Q14643 2758 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 TRGV10A0A0A0MS01 117 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 SLC31A2O15432 143 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 YPEL1O60688 119 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 CRYZL1O95825 349 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 CGB3P0DN86 165 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 CGB7P0DN87 165 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 CHRNB4P30926 498 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 RPL23AP62750 156 aaKnown RBP8.62□□□□□ -1.03
HDAC9-210ENST00000428307 TMEM267Q0VDI3 215 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-210ENST00000428307 Q6ZRG5 221 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 SAT2Q96F10 170 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-210ENST00000428307 YPEL2Q96QA6 119 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 DIRC2Q96SL1 478 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 GINS3Q9BRX5 216 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 EGLN1Q9GZT9 426 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 ARV1Q9H2C2 271 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 FAM212BQ9NTI7 297 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-210ENST00000428307 NDRG3Q9UGV2 375 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 MMP24Q9Y5R2 645 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 LRBAP50851 2863 aa8.62□□□□□ -1.03
HDAC9-210ENST00000428307 KBTBD11-OT1A0A1B0GTJ5 212 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 F2RL2O00254 374 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 RBMXL2O75526 392 aaKnown RBP8.61□□□□□ -1.03
HDAC9-210ENST00000428307 SEC11BP0C7V7 166 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 SPP1P10451 314 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 SWI5Q1ZZU3 235 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 RBMXL1Q96E39 390 aaKnown RBP8.61□□□□□ -1.03
HDAC9-210ENST00000428307 RAB40CQ96S21 281 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 HSD17B10Q99714 261 aaKnown RBP8.61□□□□□ -1.03
HDAC9-210ENST00000428307 CLN8Q9UBY8 286 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 DYSFO75923 2080 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 M0R1X1 148 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 FCGR3BO75015 233 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 MMP23AO75900 390 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 PRH1P02810 166 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 CD3EP07766 207 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 CD55P08174 381 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 METTL15P1P0C7V9 234 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 MMP9P14780 707 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 DUTP33316 252 aaKnown RBP8.61□□□□□ -1.03
HDAC9-210ENST00000428307 UBE2KP61086 200 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 ZNF616Q08AN1 781 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 ZNF266Q14584 549 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 FAM209AQ5JX71 171 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 TEX36Q5VZQ5 186 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 ZNF66Q6ZN08 573 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 C1orf229Q6ZS94 237 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-210ENST00000428307 TCF23Q7RTU1 214 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 CA5BP1Q8WTZ4 195 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 PSENENQ9NZ42 101 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 CISD1Q9NZ45 108 aaKnown RBP8.61□□□□□ -1.03
HDAC9-210ENST00000428307 WSB1Q9Y6I7 421 aa8.61□□□□□ -1.03
HDAC9-210ENST00000428307 PPIAL4EA0A075B759 164 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 TRAV38-1A0A0B4J264 116 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 RAB19A4D1S5 217 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 PPIAL4DF5H284 164 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 TMEM178BH3BS89 294 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 TOR1AO14656 332 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 TXNL1O43396 289 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 PPIAL4FP0DN26 164 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 ATP6V0CP27449 155 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 ADORA2A-AS1P86434 159 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms