RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SMIM7Q9BQ49 75 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 POMT1Q9Y6A1 747 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 IGHV2OR16-5A0A0B4J2B6 119 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 SH2D7A6NKC9 451 aaPredicted RBP9.1□□□□□ -0.95
TCOF1-204ENST00000427724 IAPPP10997 89 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 KIR2DL2P43627 348 aaPredicted RBP9.1□□□□□ -0.95
TCOF1-204ENST00000427724 DLK1P80370 383 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 AQP3Q92482 292 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 PTX4Q96A99 478 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 STARD4Q96DR4 205 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 ATG101Q9BSB4 218 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 PLXNB3Q9ULL4 1909 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 A0A1W2PPV4 95 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 XKRY2A2RUG3 117 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 MSGN1A6NI15 193 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 H3BQ15 152 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 CLDN34H7C241 214 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 M0R143 59 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 GABRA6Q16445 453 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 ECSCRQ19T08 205 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 FDX2Q6P4F2 183 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 THNSL2Q86YJ6 484 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 VPS25Q9BRG1 176 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 TMEM106BQ9NUM4 274 aa9.1□□□□□ -0.95
TCOF1-204ENST00000427724 SLC31A2O15432 143 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 PDCD6O75340 191 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 ADH4P08319 380 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 GZMHP20718 246 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 BCL3P20749 454 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 COTL1Q14019 142 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 BAGE3Q86Y29 109 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 BAGE2Q86Y30 109 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 SOX7Q9BT81 388 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 WNT5BQ9H1J7 359 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 PARP11Q9NR21 331 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 ANXA10Q9UJ72 324 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 SETD2Q9BYW2 2564 aaPredicted RBP9.09□□□□□ -0.95
TCOF1-204ENST00000427724 CDX1P47902 265 aaPredicted RBP9.09□□□□□ -0.95
TCOF1-204ENST00000427724 HOGA1Q86XE5 327 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 DCTN5Q9BTE1 182 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 MALRD1Q5VYJ5 2156 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 FAM24AA6NFZ4 105 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 APELAP0DMC3 54 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 AADACP22760 399 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 FHITP49789 147 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 HBG1P69891 147 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 HBG2P69892 147 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 TMEM267Q0VDI3 215 aaPredicted RBP9.09□□□□□ -0.95
TCOF1-204ENST00000427724 UNC119Q13432 240 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 CCDC144NLQ6NUI1 221 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 WDFY1Q8IWB7 410 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 BCL2L2Q92843 193 aaPredicted RBP9.09□□□□□ -0.95
TCOF1-204ENST00000427724 OR10C1Q96KK4 312 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 SH2D2AQ9NP31 389 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 HIF1ANQ9NWT6 349 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 MRPS18CQ9Y3D5 142 aaKnown RBP9.09□□□□□ -0.95
TCOF1-204ENST00000427724 LHFPL6Q9Y693 200 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 MTORP42345 2549 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 VPS13AQ96RL7 3174 aa9.09□□□□□ -0.95
TCOF1-204ENST00000427724 RBFOX3A6NFN3 312 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 PTBP3O95758 552 aaKnown RBP9.08□□□□□ -0.96
TCOF1-204ENST00000427724 IL18BPO95998 194 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 CD74P04233 296 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 ISG15P05161 165 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 FOXG1P55316 489 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-204ENST00000427724 COL10A1Q03692 680 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 PIGYQ3MUY2 71 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 TOMM20LQ6UXN7 152 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 ZNF596Q8TC21 504 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 LHX4Q969G2 390 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 DUX5Q96PT3 197 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 PITPNC1Q9UKF7 332 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 GPR132Q9UNW8 380 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 USP9XQ93008 2570 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-204ENST00000427724 TMEM210A6NLX4 147 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 LY6HO94772 140 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 MDH2P40926 338 aaKnown RBP9.08□□□□□ -0.96
TCOF1-204ENST00000427724 LGALS7P47929 136 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 SULT1A2P50226 295 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 BAXQ07812 192 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 IQCJQ1A5X6 159 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 ZNF343Q6P1L6 599 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 IGFL3Q6UXB1 125 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 AP1S3Q96PC3 154 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 ZDHHC11Q9H8X9 412 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 RNF122Q9H9V4 155 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 FAM206AQ9NX38 181 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 DENND4CQ5VZ89 1909 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 PF4V1P10720 104 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 TNXAQ16473 311 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 ANKRD55Q3KP44 614 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 LY6G6FQ5SQ64 297 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 C20orf204Q6ZNR8 217 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 SSX7Q7RTT5 188 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 REC114Q7Z4M0 266 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 LYZL2Q7Z4W2 148 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 C1orf162Q8NEQ5 155 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-204ENST00000427724 SLC35E1Q96K37 410 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 ZNF714Q96N38 554 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 DMRTA2Q96SC8 542 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms