RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 RPL36Q9Y3U8 105 aaKnown RBP11.1□□□□□ -0.63
PDAP1-202ENST00000426447 TNCP24821 2201 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 TRAV8-7A0A075B6U6 113 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 A0A0B4J203 849 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 A0A1W2PPK0 400 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 AIREO43918 545 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 OR2A4O95047 310 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 CD7P09564 240 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 LIMS3P0CW19 117 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 LIMS4P0CW20 117 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 DEFA5Q01523 94 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 PMS2P11Q13670 270 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 HMGN3Q15651 99 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 GUCA2BQ16661 112 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 CD300EQ496F6 205 aaPredicted RBP11.09□□□□□ -0.63
PDAP1-202ENST00000426447 SIGIRRQ6IA17 410 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 ZNF343Q6P1L6 599 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 LAX1Q8IWV1 398 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 DRAXINQ8NBI3 349 aaPredicted RBP11.09□□□□□ -0.63
PDAP1-202ENST00000426447 SETD6Q8TBK2 473 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 SNAPC3Q92966 411 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 FAM46BQ96A09 425 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 Q96M66 194 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 NEDD4LQ96PU5 975 aa11.09□□□□□ -0.63
PDAP1-202ENST00000426447 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
PDAP1-202ENST00000426447 EI24O14681 340 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 SPDEFO95238 335 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 TRBV12-3P01733 135 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 GABRB1P18505 474 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 MECP2P51608 486 aaKnown RBP11.08□□□□□ -0.64
PDAP1-202ENST00000426447 ALDH3A2P51648 485 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 Q499Y3 187 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 OR2G6Q5TZ20 316 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 RHOXF1Q8NHV9 184 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 DYNLRB2Q8TF09 96 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 SMIM19Q96E16 107 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 USMG5Q96IX5 58 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 TMEM68Q96MH6 324 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 OR14A2Q96R54 314 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 FAAP24Q9BTP7 215 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 TINAGL1Q9GZM7 467 aaPredicted RBP11.08□□□□□ -0.64
PDAP1-202ENST00000426447 CHMP1AQ9HD42 196 aaPredicted RBP11.08□□□□□ -0.64
PDAP1-202ENST00000426447 BABAM2Q9NXR7 383 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 COA4Q9NYJ1 87 aa11.08□□□□□ -0.64
PDAP1-202ENST00000426447 ZNF785A8K8V0 405 aa11.07□□□□□ -0.64
PDAP1-202ENST00000426447 OGG1O15527 345 aa11.07□□□□□ -0.64
PDAP1-202ENST00000426447 IGKV1-16P04430 117 aa11.07□□□□□ -0.64
PDAP1-202ENST00000426447 CAPGP40121 348 aa11.07□□□□□ -0.64
PDAP1-202ENST00000426447 CEACAM6P40199 344 aa11.07□□□□□ -0.64
PDAP1-202ENST00000426447 ETV1P50549 477 aa11.07□□□□□ -0.64
PDAP1-202ENST00000426447 CDH26Q8IXH8 852 aa11.07□□□□□ -0.64
PDAP1-202ENST00000426447 PHB2Q99623 299 aa11.07□□□□□ -0.64
PDAP1-202ENST00000426447 SULT4A1Q9BR01 284 aa11.07□□□□□ -0.64
PDAP1-202ENST00000426447 PARP12Q9H0J9 701 aaKnown RBP11.07□□□□□ -0.64
PDAP1-202ENST00000426447 WFDC10AQ9H1F0 79 aa11.07□□□□□ -0.64
PDAP1-202ENST00000426447 MRPS18AQ9NVS2 196 aaKnown RBP11.07□□□□□ -0.64
PDAP1-202ENST00000426447 TRBV5-5A0A0J9YX44 114 aa11.06□□□□□ -0.64
PDAP1-202ENST00000426447 NUPR2A6NF83 97 aa11.06□□□□□ -0.64
PDAP1-202ENST00000426447 H3BNX3 289 aa11.06□□□□□ -0.64
PDAP1-202ENST00000426447 APOA2P02652 100 aa11.06□□□□□ -0.64
PDAP1-202ENST00000426447 YIF1BQ5BJH7 314 aa11.06□□□□□ -0.64
PDAP1-202ENST00000426447 EDARADDQ8WWZ3 215 aa11.06□□□□□ -0.64
PDAP1-202ENST00000426447 C11orf54Q9H0W9 315 aaPredicted RBP11.06□□□□□ -0.64
PDAP1-202ENST00000426447 ZNF221Q9UK13 617 aa11.06□□□□□ -0.64
PDAP1-202ENST00000426447 ALMS1Q8TCU4 4167 aa11.06□□□□□ -0.64
PDAP1-202ENST00000426447 APELAP0DMC3 54 aa11.05□□□□□ -0.64
PDAP1-202ENST00000426447 ZBTB25P24278 435 aa11.05□□□□□ -0.64
PDAP1-202ENST00000426447 LINC00205P59089 165 aa11.05□□□□□ -0.64
PDAP1-202ENST00000426447 PJVKQ0ZLH3 352 aa11.05□□□□□ -0.64
PDAP1-202ENST00000426447 C6orf201Q7Z4U5 140 aa11.05□□□□□ -0.64
PDAP1-202ENST00000426447 PDPNQ86YL7 162 aa11.05□□□□□ -0.64
PDAP1-202ENST00000426447 ZNF383Q8NA42 475 aa11.05□□□□□ -0.64
PDAP1-202ENST00000426447 KCTD12Q96CX2 325 aaKnown RBP11.05□□□□□ -0.64
PDAP1-202ENST00000426447 AGMATQ9BSE5 352 aa11.05□□□□□ -0.64
PDAP1-202ENST00000426447 FGF20Q9NP95 211 aaPredicted RBP11.05□□□□□ -0.64
PDAP1-202ENST00000426447 GHRLQ9UBU3 117 aa11.05□□□□□ -0.64
PDAP1-202ENST00000426447 ITGB1BP1O14713 200 aa11.04□□□□□ -0.64
PDAP1-202ENST00000426447 DCKP27707 260 aa11.04□□□□□ -0.64
PDAP1-202ENST00000426447 DEFB114Q30KQ6 69 aa11.04□□□□□ -0.64
PDAP1-202ENST00000426447 SLC16A13Q7RTY0 426 aa11.04□□□□□ -0.64
PDAP1-202ENST00000426447 SVOPQ8N4V2 548 aa11.04□□□□□ -0.64
PDAP1-202ENST00000426447 RPP25LQ8N5L8 163 aaKnown RBP11.04□□□□□ -0.64
PDAP1-202ENST00000426447 ZFP41Q8N8Y5 198 aa11.04□□□□□ -0.64
PDAP1-202ENST00000426447 SLC35D1Q9NTN3 355 aa11.04□□□□□ -0.64
PDAP1-202ENST00000426447 MSGN1A6NI15 193 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 MPPED1O15442 326 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 PROP1O75360 226 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 LALBAP00709 142 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 MYL12AP19105 171 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 RASSF2P50749 326 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 RPS11P62280 158 aaKnown RBP eCLIP11.03□□□□□ -0.64
PDAP1-202ENST00000426447 ATP5G2Q06055 141 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 CEMP1Q6PRD7 247 aaPredicted RBP11.03□□□□□ -0.64
PDAP1-202ENST00000426447 CBR4Q8N4T8 237 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 PYDC1Q8WXC3 89 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 THRSPQ92748 146 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 OVOL2Q9BRP0 275 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 UQCC2Q9BRT2 126 aa11.03□□□□□ -0.64
PDAP1-202ENST00000426447 OR1A1Q9P1Q5 309 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms