RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 PTX4Q96A99 478 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 PROK2Q9HC23 129 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 SDF2L1Q9HCN8 221 aa13.68□□□□□ -0.22
PKP4-205ENST00000426248 ZNF737O75373 536 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 SPATA45Q537H7 98 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 CCDC71LQ8N9Z2 235 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 OR5AU1Q8NGC0 362 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 NANOS1Q8WY41 292 aaKnown RBP13.67□□□□□ -0.22
PKP4-205ENST00000426248 CORO2AQ92828 525 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 MANBALQ9NQG1 85 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 ZNF586Q9NXT0 402 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 PTPN13Q12923 2485 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 LOC102723971A0A1B0GUV8 181 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 IGSF23A1L1A6 192 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 FSTP19883 344 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 SLC25A53Q5H9E4 307 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 NUDT10Q8NFP7 164 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 SF3B5Q9BWJ5 86 aaKnown RBP13.67□□□□□ -0.22
PKP4-205ENST00000426248 C5orf49A4QMS7 147 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 LYZL6O75951 148 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 PSMB3P49720 205 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 TMEM50BP56557 158 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 TMEM252Q8N6L7 170 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 ZNF837Q96EG3 531 aaPredicted RBP13.67□□□□□ -0.22
PKP4-205ENST00000426248 NUDT11Q96G61 164 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 RBKSQ9H477 322 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 SLC7A10Q9NS82 523 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 BET1LQ9NYM9 111 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 DOCK11Q5JSL3 2073 aa13.67□□□□□ -0.22
PKP4-205ENST00000426248 HRASP01112 189 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 CTSDP07339 412 aaPredicted RBP13.66□□□□□ -0.22
PKP4-205ENST00000426248 GRB2P62993 217 aaKnown RBP13.66□□□□□ -0.22
PKP4-205ENST00000426248 MRPL49Q13405 166 aaKnown RBP13.66□□□□□ -0.22
PKP4-205ENST00000426248 OR2AE1Q8NHA4 323 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 SPRY4Q9C004 299 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 SELENOKQ9Y6D0 94 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 PPP1CBP62140 327 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 PCK2Q16822 640 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 TMEM170AQ8WVE7 144 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 ADAM20O43506 726 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 RIPPLY3P57055 190 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 CXorf66Q5JRM2 361 aaPredicted RBP13.66□□□□□ -0.22
PKP4-205ENST00000426248 PRRG2O14669 202 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 SPINK4O60575 86 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 RNPS1Q15287 305 aaKnown RBP13.66□□□□□ -0.22
PKP4-205ENST00000426248 NECAP2Q9NVZ3 263 aa13.66□□□□□ -0.22
PKP4-205ENST00000426248 OR6C6A6NF89 314 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 DIRC3C9JPN6 131 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 IAPPP10997 89 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 IGFBP3P17936 291 aaPredicted RBP13.65□□□□□ -0.22
PKP4-205ENST00000426248 Q8NFD4 153 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 TUBD1Q9UJT1 453 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 A0A0A6YYD4 124 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 IL6RP08887 468 aaPredicted RBP13.65□□□□□ -0.22
PKP4-205ENST00000426248 RAB35Q15286 201 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 GFRALQ6UXV0 394 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 LIAT1Q6ZQX7 453 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 BOD1Q96IK1 185 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 FAM234AQ9H0X4 552 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 SONP18583 2426 aaKnown RBP13.65□□□□□ -0.22
PKP4-205ENST00000426248 ZGRF1Q86YA3 2104 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 ACACBO00763 2458 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 GCH1P30793 250 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 BORCS8Q96FH0 119 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 ABHD17AQ96GS6 310 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 PIGLQ9Y2B2 252 aa13.65□□□□□ -0.22
PKP4-205ENST00000426248 RAB29O14966 203 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 ANGPTL7O43827 346 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 FAM87AP0C7U9 286 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 GZMHP20718 246 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 RIPPLY2Q5TAB7 128 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 FBXW9Q5XUX1 488 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 TMEM106BQ9NUM4 274 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 CRYM-AS1A6NIL9 109 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 TNFSF13O75888 250 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 CRISP2P16562 243 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 TCF23Q7RTU1 214 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 STPG4Q8N801 248 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 SLC25A22Q9H936 323 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 LYRM2Q9NU23 88 aaPredicted RBP13.64□□□□□ -0.23
PKP4-205ENST00000426248 LAMTOR2Q9Y2Q5 125 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 IGKV1D-8A0A087WSZ0 117 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 DNPH1O43598 174 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 LMO1P25800 156 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 AMTP48728 403 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 PRR27Q6MZM9 219 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 PECRQ9BY49 303 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 GPR35Q9HC97 309 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 RPRMQ9NS64 109 aa13.64□□□□□ -0.23
PKP4-205ENST00000426248 CHST1O43916 411 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 FAHP16930 419 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 OR8G2PQ6IF36 304 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 IMMP2LQ96T52 175 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 WIPI2Q9Y4P8 454 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 CSPG4Q6UVK1 2322 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 NKX6-3A6NJ46 265 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 KIAA1324LA8MWY0 1029 aaPredicted RBP13.63□□□□□ -0.23
PKP4-205ENST00000426248 UBE2G2P60604 165 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 FAM90A2PQ658T7 463 aa13.63□□□□□ -0.23
PKP4-205ENST00000426248 SPACA3Q8IXA5 215 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms