RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 IRF2P14316 349 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 PAX9P55771 341 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 ICAM4Q14773 271 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 TBC1D28Q2M2D7 210 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 BTNL3Q6UXE8 466 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 ZNF705AQ6ZN79 300 aaPredicted RBP11.02□□□□□ -0.65
COL12A1-205ENST00000425443 FAM58AQ8N1B3 248 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 CYB561D1Q8N8Q1 229 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 MDS2Q8NDY4 140 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 OR1K1Q8NGR3 316 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 Q8WTZ3 238 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 MALSU1Q96EH3 234 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 TMEM56Q96MV1 263 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 SPIN2AQ99865 258 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 SPIN2BQ9BPZ2 258 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 LYRM2Q9NU23 88 aaPredicted RBP11.02□□□□□ -0.65
COL12A1-205ENST00000425443 ERRFI1Q9UJM3 462 aaPredicted RBP11.02□□□□□ -0.65
COL12A1-205ENST00000425443 MPC1Q9Y5U8 109 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 TMEM56-RWDD3S4R434 201 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 ROS1P08922 2347 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 CADP27708 2225 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 PITX3O75364 302 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 SOD3P08294 240 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 SRP19P09132 144 aaKnown RBP11.02□□□□□ -0.65
COL12A1-205ENST00000425443 IAPPP10997 89 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 ERVFRD-1P60508 538 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 PMP22Q01453 160 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 NMSQ5H8A3 153 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 OR5P3Q8WZ94 311 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 PBDC1Q9BVG4 233 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 CDH20Q9HBT6 801 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 TAAR3PQ9P1P4 343 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 KCNS2Q9ULS6 477 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 PPP1R3CQ9UQK1 317 aa11.02□□□□□ -0.65
COL12A1-205ENST00000425443 PPP1R2P9O14990 202 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 DEGS1O15121 323 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 CTXN2P0C2S0 81 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 IDH3GP51553 393 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-205ENST00000425443 CCL11P51671 97 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 TRIP6Q15654 476 aaKnown RBP11.01□□□□□ -0.65
COL12A1-205ENST00000425443 FAM210BQ96KR6 192 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 IL19Q9UHD0 177 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 TGIF2-C20orf24A0A0A6YYL0 155 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 OR5B21A6NL26 309 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 SIRPB1O00241 398 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 CDS2O95674 445 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 IL18BPO95998 194 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 MAS1LP35410 378 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 TGFBR3Q03167 851 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 ATP23Q9Y6H3 246 aa11.01□□□□□ -0.65
COL12A1-205ENST00000425443 A0A1B0GW64 132 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 SMCO3A2RU48 225 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 NAPSAO96009 420 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 SERPINE2P07093 398 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 FGF7P21781 194 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 SLAQ13239 276 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 CLEC12BQ2HXU8 276 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 MRGPRDQ8TDS7 321 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 WDYHV1Q96HA8 205 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 PLEKHF2Q9H8W4 249 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 OR1A1Q9P1Q5 309 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 COL27A1Q8IZC6 1860 aaPredicted RBP11□□□□□ -0.65
COL12A1-205ENST00000425443 OR5H1A6NKK0 313 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 PSG2P11465 335 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 RPS16P62249 146 aaKnown RBP11□□□□□ -0.65
COL12A1-205ENST00000425443 DLK1P80370 383 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 ELOBQ15370 118 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 RNFT1Q5M7Z0 435 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 CNEP1R1Q8N9A8 125 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 ALKBH7Q9BT30 221 aaPredicted RBP11□□□□□ -0.65
COL12A1-205ENST00000425443 VSIRQ9H7M9 311 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 SPRR3Q9UBC9 169 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 RNF115Q9Y4L5 304 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 WDR1O75083 606 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 LYZL6O75951 148 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 ZNF266Q14584 549 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 CXorf67Q86X51 503 aaPredicted RBP11□□□□□ -0.65
COL12A1-205ENST00000425443 RTL8AQ9BWD3 113 aa11□□□□□ -0.65
COL12A1-205ENST00000425443 ID3Q02535 119 aa10.99□□□□□ -0.65
COL12A1-205ENST00000425443 Q6ZRM9 215 aa10.99□□□□□ -0.65
COL12A1-205ENST00000425443 WFDC8Q8IUA0 241 aa10.99□□□□□ -0.65
COL12A1-205ENST00000425443 BCL2L2Q92843 193 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-205ENST00000425443 CCL25O15444 150 aa10.99□□□□□ -0.65
COL12A1-205ENST00000425443 PAX1P15863 534 aa10.99□□□□□ -0.65
COL12A1-205ENST00000425443 ZNF429Q86V71 674 aa10.99□□□□□ -0.65
COL12A1-205ENST00000425443 TRIB1Q96RU8 372 aa10.99□□□□□ -0.65
COL12A1-205ENST00000425443 RSG1Q9BU20 258 aa10.99□□□□□ -0.65
COL12A1-205ENST00000425443 OR2J1Q9GZK6 312 aa10.99□□□□□ -0.65
COL12A1-205ENST00000425443 TRAPPC2LQ9UL33 140 aa10.99□□□□□ -0.65
COL12A1-205ENST00000425443 ZFP92A6NM28 416 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 GRPP07492 148 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 ATP6V1FQ16864 119 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 LCN15Q6UWW0 184 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 CLDND2Q8NHS1 167 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 SEC14L6B5MCN3 397 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 PGLYRP1O75594 196 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-205ENST00000425443 TFF1P04155 84 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 CELA3BP08861 270 aa10.98□□□□□ -0.65
COL12A1-205ENST00000425443 CEBPDP49716 269 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-205ENST00000425443 ERVS71-1P61550 626 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms