RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 MAGEL2Q9UJ55 1249 aa4.57□□□□□ -1.68
SDCBP-203ENST00000424270 FLG2Q5D862 2391 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-203ENST00000424270 DNAH5Q8TE73 4624 aa4.57□□□□□ -1.68
SDCBP-203ENST00000424270 IGKV1-9A0A0C4DH69 117 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 A0A0G2JND7 137 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 NBDYA0A0U1RRE5 68 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 FAM90A23PA8MXZ1 464 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 PRR32B1ATL7 298 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 ZNF670-ZNF695F2Z2N8 137 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 EREGO14944 169 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 ARPC2O15144 300 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 MRPS14O60783 128 aaKnown RBP4.56□□□□□ -1.68
SDCBP-203ENST00000424270 OR2J3O76001 311 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 OR9G9P0C7N8 305 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 MIFP14174 115 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 CCL1P22362 96 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 PPP1CCP36873 323 aaKnown RBP4.56□□□□□ -1.68
SDCBP-203ENST00000424270 HTD2P86397 168 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 IL13RA2Q14627 380 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 GNMTQ14749 295 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 ZNF124Q15973 351 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 C15orf32Q32M92 178 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 COQ5Q5HYK3 327 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 SYT6Q5T7P8 510 aaPredicted RBP4.56□□□□□ -1.68
SDCBP-203ENST00000424270 LPCAT4Q643R3 524 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 CLEC19AQ6UXS0 136 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 ZNF833PQ6ZTB9 187 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 Q8NAQ8 132 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 SETD9Q8NE22 299 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 BBS1Q8NFJ9 593 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 OR52L2PQ8NGH6 319 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 OR10K1Q8NGX5 313 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 OR4K15Q8NH41 348 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 TRIM63Q969Q1 353 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 C10orf35Q96D05 121 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 ADAT3Q96EY9 351 aaPredicted RBP4.56□□□□□ -1.68
SDCBP-203ENST00000424270 BTBD10Q9BSF8 475 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 TMEM109Q9BVC6 243 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 CMTM6Q9NX76 183 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 RCC2Q9P258 522 aaKnown RBP4.56□□□□□ -1.68
SDCBP-203ENST00000424270 UFC1Q9Y3C8 167 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 RNF213Q63HN8 5207 aa4.56□□□□□ -1.68
SDCBP-203ENST00000424270 IGKV3-7A0A075B6H7 116 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 A0A1B0GW64 132 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 KRTAP29-1A8MX34 341 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-203ENST00000424270 SRSF10O75494 262 aaKnown RBP4.55□□□□□ -1.68
SDCBP-203ENST00000424270 KRT36O76013 467 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 SPDEFO95238 335 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 APOA2P02652 100 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 UBCP0CG48 685 aaKnown RBP4.55□□□□□ -1.68
SDCBP-203ENST00000424270 MYOD1P15172 320 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 ELLP55199 621 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-203ENST00000424270 CMC4P56277 68 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-203ENST00000424270 ALKBH1Q13686 389 aaKnown RBP4.55□□□□□ -1.68
SDCBP-203ENST00000424270 TNXAQ16473 311 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 C12orf74Q32Q52 190 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 MORN2Q502X0 79 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 GLT8D1Q68CQ7 371 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 GLYATQ6IB77 296 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 TRAT1Q6PIZ9 186 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 FAM220AQ7Z4H9 259 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 GPHB5Q86YW7 130 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 SLC35F2Q8IXU6 374 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 NECAP1Q8NC96 275 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 OR13C3Q8NGS6 347 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 TMEM163Q8TC26 289 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 TNFAIP8L1Q8WVP5 186 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 ACOT12Q8WYK0 555 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 CPNE2Q96FN4 548 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-203ENST00000424270 PYURFQ96I23 114 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 MYCBPQ99417 103 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-203ENST00000424270 S100A13Q99584 98 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 TBX5Q99593 518 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 RNF5Q99942 180 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 YTHDF1Q9BYJ9 559 aaKnown RBP4.55□□□□□ -1.68
SDCBP-203ENST00000424270 C5orf66Q9H5L9 145 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 MRPL27Q9P0M9 148 aaKnown RBP4.55□□□□□ -1.68
SDCBP-203ENST00000424270 PIPOXQ9P0Z9 390 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 STEAP1Q9UHE8 339 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 ST3GAL6Q9Y274 331 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 S4R3C0 116 aa4.55□□□□□ -1.68
SDCBP-203ENST00000424270 AGRNO00468 2067 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 IGHV3-35A0A0C4DH35 117 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 DPPA5A6NC42 116 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 A8MWP6 167 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 MCRIP1C9JLW8 97 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 H0YJW9 148 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 J3KRW8 73 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 TSPAN4O14817 238 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 RAB29O14966 203 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 RBMXL2O75526 392 aaKnown RBP4.54□□□□□ -1.68
SDCBP-203ENST00000424270 ACTL6BO94805 426 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 MT-ND4P03905 459 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 MAS1P04201 325 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 HMGN1P05114 100 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 HNRNPCP07910 306 aaKnown RBP eCLIP4.54□□□□□ -1.68
SDCBP-203ENST00000424270 EMP1P54849 157 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 XGP55808 180 aa4.54□□□□□ -1.68
SDCBP-203ENST00000424270 FAM3BP58499 235 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms