RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PRO1933Q9H354 126 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 HES4Q9HCC6 221 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 KCNIP2Q9NS61 270 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 KCNS2Q9ULS6 477 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 A0A1W2PR80 420 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 CCL2P13500 99 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 SELEP16581 610 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 OTX2P32243 289 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 RPL15P61313 204 aaKnown RBP12.8□□□□□ -0.36
C9orf3-204ENST00000424143 PAX5Q02548 391 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 DCAF12Q5T6F0 453 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 C6orf15Q6UXA7 325 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-204ENST00000424143 TDHQ8IZJ6 230 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 C17orf78Q8N4C9 275 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 GBGT1Q8N5D6 347 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 OR1K1Q8NGR3 316 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 PRR7Q8TB68 274 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 GMPPAQ96IJ6 420 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-204ENST00000424143 NPCDR1Q9BY65 106 aa12.8□□□□□ -0.36
C9orf3-204ENST00000424143 WDR1O75083 606 aa12.79□□□□□ -0.36
C9orf3-204ENST00000424143 RHBDL1O75783 438 aa12.79□□□□□ -0.36
C9orf3-204ENST00000424143 MPLP40238 635 aa12.79□□□□□ -0.36
C9orf3-204ENST00000424143 CNN1P51911 297 aaKnown RBP12.79□□□□□ -0.36
C9orf3-204ENST00000424143 ZNF766Q5HY98 468 aa12.79□□□□□ -0.36
C9orf3-204ENST00000424143 OR8G2PQ6IF36 304 aa12.79□□□□□ -0.36
C9orf3-204ENST00000424143 SCCPDHQ8NBX0 429 aa12.79□□□□□ -0.36
C9orf3-204ENST00000424143 DTD1Q8TEA8 209 aa12.79□□□□□ -0.36
C9orf3-204ENST00000424143 WDR83OSQ9Y284 106 aa12.79□□□□□ -0.36
C9orf3-204ENST00000424143 ODAMA1E959 279 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 OOEPA6NGQ2 149 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 LILRA1O75019 489 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 NEURL1O76050 574 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 CER1O95813 267 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 RAC2P15153 192 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 IGFBP4P22692 258 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 CA6P23280 308 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 IDH3GP51553 393 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-204ENST00000424143 FOXG1P55316 489 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-204ENST00000424143 ERVS71-1P61550 626 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 SSX2Q16385 188 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 PDLIM3Q53GG5 364 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-204ENST00000424143 BTNL3Q6UXE8 466 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 CT55Q8WUE5 264 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 GALMQ96C23 342 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 WDYHV1Q96HA8 205 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 LURAP1Q96LR2 239 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 NEU1Q99519 415 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 TMEM204Q9BSN7 226 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 DDA1Q9BW61 102 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 SLC25A22Q9H936 323 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 SIT1Q9Y3P8 196 aa12.78□□□□□ -0.36
C9orf3-204ENST00000424143 CHD3Q12873 2000 aaKnown RBP12.78□□□□□ -0.36
C9orf3-204ENST00000424143 TMEM265A0A087WTH1 108 aa12.77□□□□□ -0.36
C9orf3-204ENST00000424143 IL18BPO95998 194 aa12.77□□□□□ -0.36
C9orf3-204ENST00000424143 ZNF16P17020 682 aaPredicted RBP12.77□□□□□ -0.36
C9orf3-204ENST00000424143 CDC34P49427 236 aaPredicted RBP12.77□□□□□ -0.36
C9orf3-204ENST00000424143 TMPRSS3P57727 454 aa12.77□□□□□ -0.36
C9orf3-204ENST00000424143 YPEL3P61236 119 aaPredicted RBP12.77□□□□□ -0.36
C9orf3-204ENST00000424143 MRPL49Q13405 166 aaKnown RBP12.77□□□□□ -0.36
C9orf3-204ENST00000424143 UNQ6494/PRO21346Q6UXR6 183 aa12.77□□□□□ -0.36
C9orf3-204ENST00000424143 WDR86Q86TI4 376 aa12.77□□□□□ -0.36
C9orf3-204ENST00000424143 LINC01551Q86U37 167 aa12.77□□□□□ -0.36
C9orf3-204ENST00000424143 HSD17B10Q99714 261 aaKnown RBP12.77□□□□□ -0.36
C9orf3-204ENST00000424143 SPRY4Q9C004 299 aa12.77□□□□□ -0.36
C9orf3-204ENST00000424143 ABI3Q9P2A4 366 aa12.77□□□□□ -0.36
C9orf3-204ENST00000424143 PXMP4Q9Y6I8 212 aa12.77□□□□□ -0.36
C9orf3-204ENST00000424143 KIAA2026Q5HYC2 2103 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 A0A1W2PPQ1 181 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 IQCF6A8MYZ5 107 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 C11orf94C9JXX5 98 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 SIRPB1O00241 398 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 PAGE4O60829 102 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 TUBG1P23258 451 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 RPP30P78346 268 aaKnown RBP12.77□□□□□ -0.37
C9orf3-204ENST00000424143 P2RY6Q15077 328 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 TBC1D28Q2M2D7 210 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 C1orf194Q5T5A4 169 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 TRAT1Q6PIZ9 186 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 Q8N7P7 452 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 OR52E5Q8NH55 327 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 MISP3Q96FF7 219 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 TUBG2Q9NRH3 451 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 FUT9Q9Y231 359 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 LY96Q9Y6Y9 160 aa12.77□□□□□ -0.37
C9orf3-204ENST00000424143 MT-CO3P00414 261 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 JMJD7P0C870 316 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 RNF224P0DH78 156 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 ESDP10768 282 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 NDUFB7P17568 137 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 NPPCP23582 126 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 IL3RAP26951 378 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 ERVFC1-1P60608 527 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
C9orf3-204ENST00000424143 NUTF2P61970 127 aaKnown RBP12.76□□□□□ -0.37
C9orf3-204ENST00000424143 PPP1CBP62140 327 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 TRIP6Q15654 476 aaKnown RBP12.76□□□□□ -0.37
C9orf3-204ENST00000424143 FBXW9Q5XUX1 488 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 MCEMP1Q8IX19 187 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 TMEM37Q8WXS4 190 aa12.76□□□□□ -0.37
C9orf3-204ENST00000424143 ELOVL1Q9BW60 279 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms