RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ABCG5Q9H222 651 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 DCSTAMPQ9H295 470 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 KIAA1456Q9P272 454 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 RNF150Q9ULK6 438 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 TRAV18A0A075B6X5 111 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 NBR2O15453 112 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 RBBP9O75884 186 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 APOA2P02652 100 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 TFAP2AP05549 437 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 CT45A6P0DMU7 189 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 CT45A5P0DMU8 189 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 CT45A7P0DMV0 189 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 PF4V1P10720 104 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 F2RL1P55085 397 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 CD83Q01151 205 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 HIST2H2BDQ6DRA6 164 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 FAM131AQ6UXB0 335 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 STPG2Q8N412 459 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 FAM71E2Q8N5Q1 922 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.66□□□□□ -1.02
USP49-204ENST00000423567 NUDCD2Q8WVJ2 157 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 S100A16Q96FQ6 103 aaKnown RBP8.66□□□□□ -1.02
USP49-204ENST00000423567 FUNDC2Q9BWH2 189 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 TOLLIPQ9H0E2 274 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 PLSCR3Q9NRY6 295 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 ZNF107Q9UII5 783 aaPredicted RBP8.66□□□□□ -1.02
USP49-204ENST00000423567 SPATA2Q9UM82 520 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 WASHC3Q9Y3C0 194 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 TSSC4Q9Y5U2 329 aaPredicted RBP8.66□□□□□ -1.02
USP49-204ENST00000423567 MGAM2Q2M2H8 2515 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 NBEAL1Q6ZS30 2694 aa8.66□□□□□ -1.02
USP49-204ENST00000423567 TET2Q6N021 2002 aaPredicted RBP8.65□□□□□ -1.02
USP49-204ENST00000423567 A0A1W2PRX2 142 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 M0R1X1 148 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 OR8U9P0C7N5 309 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 VDAC1P21796 283 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 TGFBR1P36897 503 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 RPS19P39019 145 aaKnown RBP8.65□□□□□ -1.02
USP49-204ENST00000423567 CBX3Q13185 183 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 PLGLAQ15195 96 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 ZNF260Q3ZCT1 412 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 GLDNQ6ZMI3 551 aaPredicted RBP8.65□□□□□ -1.02
USP49-204ENST00000423567 ZNF329Q86UD4 541 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 OR13F1Q8NGS4 319 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 OR8U1Q8NH10 309 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 SLC25A38Q96DW6 304 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 NOL4LQ96MY1 436 aaPredicted RBP8.65□□□□□ -1.02
USP49-204ENST00000423567 RNF5Q99942 180 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 OR2D2Q9H210 308 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 LINC00527Q9UJ94 153 aa8.65□□□□□ -1.02
USP49-204ENST00000423567 ELF5Q9UKW6 265 aaPredicted RBP8.65□□□□□ -1.02
USP49-204ENST00000423567 H0YJW9 148 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 HLA-DRB1P01911 266 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 OR5H8P0DN80 308 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 TAGLNQ01995 201 aaKnown RBP8.64□□□□□ -1.03
USP49-204ENST00000423567 C5orf64Q2M2E5 130 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 UBE2NLQ5JXB2 153 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 LIN54Q6MZP7 749 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 TEX38Q6PEX7 206 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 CNIH2Q6PI25 160 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 PDPNQ86YL7 162 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 SAMD12Q8N8I0 201 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 NPBQ8NG41 125 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 OR5AN1Q8NGI8 311 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 SLC25A46Q96AG3 418 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 MRPS26Q9BYN8 205 aaKnown RBP8.64□□□□□ -1.03
USP49-204ENST00000423567 ANXA10Q9UJ72 324 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 GAB2Q9UQC2 676 aa8.64□□□□□ -1.03
USP49-204ENST00000423567 IGKV1D-8A0A087WSZ0 117 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 SLC22A5O76082 557 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 PF4P02776 101 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 CNTFRP26992 372 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 CBX5P45973 191 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 LUMP51884 338 aaPredicted RBP8.63□□□□□ -1.03
USP49-204ENST00000423567 ARPC4P59998 168 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 VBP1P61758 197 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 NCS1P62166 190 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 RPS16P62249 146 aaKnown RBP8.63□□□□□ -1.03
USP49-204ENST00000423567 TCTEX1D4Q5JR98 221 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 CXorf66Q5JRM2 361 aaPredicted RBP8.63□□□□□ -1.03
USP49-204ENST00000423567 C10orf99Q6UWK7 81 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 GPR141Q7Z602 305 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 H1FOOQ8IZA3 346 aaPredicted RBP8.63□□□□□ -1.03
USP49-204ENST00000423567 DRAXINQ8NBI3 349 aaPredicted RBP8.63□□□□□ -1.03
USP49-204ENST00000423567 FLYWCH2Q96CP2 140 aaKnown RBP8.63□□□□□ -1.03
USP49-204ENST00000423567 RBMXL1Q96E39 390 aaKnown RBP8.63□□□□□ -1.03
USP49-204ENST00000423567 RITA1Q96K30 269 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 TSNAXQ99598 290 aaKnown RBP8.63□□□□□ -1.03
USP49-204ENST00000423567 HSPB9Q9BQS6 159 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 AUNIPQ9H7T9 357 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 ZFP57Q9NU63 452 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 SDHAF2Q9NX18 166 aa8.63□□□□□ -1.03
USP49-204ENST00000423567 SMIM31A0A1B0GVY4 71 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 LINC01548A6NM66 108 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 ADARB2-AS1A8MUL3 147 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 NUDT19A8MXV4 375 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 RRHO14718 337 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 XRCC3O43542 346 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 SSX5O60225 188 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 NDUFA3O95167 84 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms