RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 C1orf87Q8N0U7 546 aa13.27□□□□□ -0.28
CDH1-202ENST00000422392 CDH20Q9HBT6 801 aa13.27□□□□□ -0.28
CDH1-202ENST00000422392 SLC39A9Q9NUM3 307 aa13.27□□□□□ -0.28
CDH1-202ENST00000422392 INTS1Q8N201 2190 aaKnown RBP13.27□□□□□ -0.29
CDH1-202ENST00000422392 CLDN34H7C241 214 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 WISP2O76076 250 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 CD81P60033 236 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 NKX6-1P78426 367 aaPredicted RBP13.27□□□□□ -0.29
CDH1-202ENST00000422392 WDR25Q64LD2 544 aaPredicted RBP13.27□□□□□ -0.29
CDH1-202ENST00000422392 NECAP1Q8NC96 275 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 VAX2Q9UIW0 290 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 FZR1Q9UM11 496 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 WIPI2Q9Y4P8 454 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 ICE1Q9Y2F5 2266 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 IGHV3-43A0A0B4J1X8 118 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 B4DEV8 164 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 ZG16O60844 167 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 IGHV3-43DP0DP04 118 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 IGHV1-2P23083 117 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 BRWD1-AS2P59051 145 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 ADIRFQ15847 76 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 DHRS13Q6UX07 377 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 Q8IYB0 196 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 RPUSD4Q96CM3 377 aaKnown RBP13.27□□□□□ -0.29
CDH1-202ENST00000422392 OBP2BQ9NPH6 170 aa13.27□□□□□ -0.29
CDH1-202ENST00000422392 DMXL1Q9Y485 3027 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 PTPRBP23467 1997 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 TRGV5A0A0B4J1U4 118 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 ODAMA1E959 279 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 C17orf98A8MV24 154 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 C21orf140B9A014 251 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 CLEC12BQ2HXU8 276 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 TMEM14EPQ6UXP3 125 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 MRGPRGQ86SM5 289 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 ZNF645Q8N7E2 425 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 ZNF383Q8NA42 475 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 MRGPRDQ8TDS7 321 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 SMIM7Q9BQ49 75 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 UFSP2Q9NUQ7 469 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 CADP27708 2225 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 PPP1R2P9O14990 202 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 AGFG2O95081 481 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 IL2RGP31785 369 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 TFF3Q07654 80 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 PNRC1Q12796 327 aaPredicted RBP13.26□□□□□ -0.29
CDH1-202ENST00000422392 HIST3H2BBQ8N257 126 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 GALMQ96C23 342 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 PLPPR2Q96GM1 343 aa13.26□□□□□ -0.29
CDH1-202ENST00000422392 PIGBOS1A0A0B4J2F0 54 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 DEFB108AA8MXU0 73 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 MLNRO43193 412 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 FABP4P15090 132 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 SSTR5P35346 364 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 UBE2NP61088 152 aaKnown RBP13.25□□□□□ -0.29
CDH1-202ENST00000422392 SNX22Q96L94 193 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 HBZP02008 142 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 GABRA2P47869 451 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 RND2P52198 227 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 ARG2P78540 354 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 ZNF766Q5HY98 468 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 PRAMEF6Q5VXH4 476 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 RFESDQ8TAC1 157 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 KCNIP1Q9NZI2 227 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 HSPB7Q9UBY9 170 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 METRNQ9UJH8 293 aa13.25□□□□□ -0.29
CDH1-202ENST00000422392 RBMXL2O75526 392 aaKnown RBP13.24□□□□□ -0.29
CDH1-202ENST00000422392 TNFSF15O95150 251 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 CD46P15529 392 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 MEF2BQ02080 365 aaPredicted RBP13.24□□□□□ -0.29
CDH1-202ENST00000422392 RTP5Q14D33 572 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 KLF14Q8TD94 323 aaPredicted RBP13.24□□□□□ -0.29
CDH1-202ENST00000422392 PINX1Q96BK5 328 aaKnown RBP13.24□□□□□ -0.29
CDH1-202ENST00000422392 COQ2Q96H96 371 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 P2RX4Q99571 388 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 OR5H1A6NKK0 313 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 LRRC30A6NM36 301 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 SEC14L6B5MCN3 397 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 FGF7P21781 194 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 BMP5P22003 454 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 MRPL49Q13405 166 aaKnown RBP13.24□□□□□ -0.29
CDH1-202ENST00000422392 LTC4SQ16873 150 aa13.24□□□□□ -0.29
CDH1-202ENST00000422392 TET2Q6N021 2002 aaPredicted RBP13.23□□□□□ -0.29
CDH1-202ENST00000422392 TMEM30CPA0ZSE6 113 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 LINC00473A8K010 186 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 RAC2P15153 192 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 TUBG1P23258 451 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 NCR3LG1Q68D85 454 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 C16orf82Q7Z2V1 217 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 C11orf53Q8IXP5 236 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 DCTN5Q9BTE1 182 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 TMEM242Q9NWH2 141 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 DMRT1Q9Y5R6 373 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 RNF212BA8MTL3 300 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 PHOX2AO14813 284 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 CD59P13987 128 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 OR13D1Q8NGV5 346 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 PFDN5Q99471 154 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 MSL2Q9HCI7 577 aa13.23□□□□□ -0.29
CDH1-202ENST00000422392 PMS2P5A8MQ11 134 aa13.22□□□□□ -0.29
CDH1-202ENST00000422392 IQCF6A8MYZ5 107 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms