RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PCSK4Q6UW60 755 aa9.72□□□□□ -0.85
PTCH1-205ENST00000418258 SNX22Q96L94 193 aa9.72□□□□□ -0.85
PTCH1-205ENST00000418258 EP300Q09472 2414 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-205ENST00000418258 ZNF826PQ6ZT77 177 aa9.72□□□□□ -0.85
PTCH1-205ENST00000418258 RNF133Q8WVZ7 376 aa9.72□□□□□ -0.85
PTCH1-205ENST00000418258 PHYHIPLQ96FC7 376 aa9.72□□□□□ -0.85
PTCH1-205ENST00000418258 C1QAP02745 245 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 MPV17P39210 176 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 IER3P46695 156 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 WDFY2Q96P53 400 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 AURKAIP1Q9NWT8 199 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-205ENST00000418258 MGST3O14880 152 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 IGKV3-20P01619 116 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 UQCRFS1P47985 274 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 RPL8P62917 257 aaKnown RBP9.71□□□□□ -0.85
PTCH1-205ENST00000418258 COL13A1Q5TAT6 717 aaPredicted RBP9.71□□□□□ -0.85
PTCH1-205ENST00000418258 NEURL2Q9BR09 285 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 NPVFQ9HCQ7 196 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 NEU3Q9UQ49 428 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 RAXQ9Y2V3 346 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 SBF2Q86WG5 1849 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 FAM27BQ5VT28 67 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 TMEM52Q8NDY8 209 aa9.71□□□□□ -0.85
PTCH1-205ENST00000418258 RAG2P55895 527 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 EWSR1Q01844 656 aaKnown RBP eCLIP9.71□□□□□ -0.86
PTCH1-205ENST00000418258 XAF1Q6GPH4 301 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 LINC01560Q8TB33 94 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 SCNM1Q9BWG6 230 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 TRAV8-7A0A075B6U6 113 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 A0A0U1RQV5 110 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 OR2H2O95918 312 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 NUDT3O95989 172 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 REG1AP05451 166 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 SNRPD3P62318 126 aaKnown RBP9.71□□□□□ -0.86
PTCH1-205ENST00000418258 DLK1P80370 383 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 SFXN3Q9BWM7 321 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 RAB33BQ9H082 229 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 SCGB1A1P11684 91 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 CDCP2Q5VXM1 449 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 MRAP2Q96G30 205 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 PRDM6Q9NQX0 595 aa9.71□□□□□ -0.86
PTCH1-205ENST00000418258 SNURFLB1AK76 121 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 STAG3L2P0CL84 134 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 MARS2Q96GW9 593 aaKnown RBP9.7□□□□□ -0.86
PTCH1-205ENST00000418258 DOCK11Q5JSL3 2073 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 LY75O60449 1722 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 FOXH1O75593 365 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 RAB9AP51151 201 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 MFAP4P55083 255 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 FGF12P61328 243 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 GCSAMQ8N6F7 178 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 SAP25Q8TEE9 199 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 MRPL24Q96A35 216 aaKnown RBP9.7□□□□□ -0.86
PTCH1-205ENST00000418258 LOC102724200A0A096LPH7 203 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-205ENST00000418258 HMSDA8MTL9 139 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 CTDSPLO15194 276 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 SP7Q8TDD2 431 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-205ENST00000418258 IL36RNQ9UBH0 155 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 IL19Q9UHD0 177 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 WNK3Q9BYP7 1800 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 IGHV1-69-2A0A0G2JMI3 117 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 CD160O95971 181 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 NMUP48645 174 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 SCN10AQ9Y5Y9 1956 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 M0R143 59 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 S1PR2O95136 353 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 IGKV1D-16P01601 117 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 ANGPTL4Q9BY76 406 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 FDCSPQ8NFU4 85 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 POM121Q96HA1 1249 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 RALGAPA2Q2PPJ7 1873 aa9.7□□□□□ -0.86
PTCH1-205ENST00000418258 SLC25A17O43808 307 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 PLAUP00749 431 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 RAB37Q96AX2 223 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 PRO1933Q9H354 126 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 PPP1R17O96001 155 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 LIPFP07098 398 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 CKS2P33552 79 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 SSTR5P35346 364 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 IGSF11Q5DX21 431 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-205ENST00000418258 WDR25Q64LD2 544 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-205ENST00000418258 ABHD12Q8N2K0 398 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 IDI2-AS1Q9NZ38 188 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 PXMP4Q9Y6I8 212 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 CACNA1BQ00975 2339 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 AP4M1O00189 453 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 CD81P60033 236 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 MARVELD1Q9BSK0 173 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 SUCLG1P53597 346 aaKnown RBP9.69□□□□□ -0.86
PTCH1-205ENST00000418258 RELQ04864 619 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-205ENST00000418258 FOXB2Q5VYV0 432 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 CYB5R1Q9UHQ9 305 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 OR4C45A6NMZ5 311 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 LINC00869P0C866 280 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 LEAP2Q969E1 77 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 FUT9Q9Y231 359 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 SYNGR3O43761 229 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 GPX1P07203 203 aa9.69□□□□□ -0.86
PTCH1-205ENST00000418258 OR5AU1Q8NGC0 362 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms